Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC005412.1-201ENST00000580812 1049 ntBASIC3.43□□□□□ -1.86
ECHDC3Q96DC8 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.43□□□□□ -1.86
ECHDC3Q96DC8 ELOCP35-201ENST00000604289 336 ntBASIC3.43□□□□□ -1.86
ECHDC3Q96DC8 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.43□□□□□ -1.86
ECHDC3Q96DC8 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.43□□□□□ -1.86
ECHDC3Q96DC8 AC084757.4-201ENST00000616350 526 ntBASIC3.43□□□□□ -1.86
ECHDC3Q96DC8 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.43□□□□□ -1.86
ECHDC3Q96DC8 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
ECHDC3Q96DC8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
ECHDC3Q96DC8 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 HMGB3P18-201ENST00000406327 590 ntBASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 MIR1303-201ENST00000408625 86 ntBASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 AC023128.2-201ENST00000420880 1223 ntBASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 MORF4L1P7-201ENST00000426038 703 ntBASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 RPL23AP33-201ENST00000442301 452 ntBASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 HMGB3P8-201ENST00000449709 577 ntBASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 MTND2P3-201ENST00000452458 470 ntBASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 AC112198.1-201ENST00000505369 1220 ntBASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 TMEM248P1-201ENST00000510579 951 ntBASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 AC103833.1-201ENST00000517442 172 ntBASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 OR4R3P-201ENST00000525084 838 ntBASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 MTND2P26-201ENST00000528255 1029 ntBASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 AC074029.1-201ENST00000552531 1044 ntBASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 MIR3186-201ENST00000577404 85 ntBASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 AC135178.6-201ENST00000605314 398 ntBASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 OR2BH1P-201ENST00000608850 864 ntBASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 AC004777.1-201ENST00000624317 287 ntBASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 SAGE4P-201ENST00000442271 3381 ntBASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
ECHDC3Q96DC8 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 RNU6-543P-201ENST00000362576 108 ntBASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 RNA5SP72-201ENST00000364442 117 ntBASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 RNU6-883P-201ENST00000384597 107 ntBASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 MIR34B-201ENST00000385076 84 ntBASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 Z99755.1-201ENST00000414048 380 ntBASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 NUP35P2-201ENST00000416748 943 ntBASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 AC006994.1-201ENST00000438212 839 ntBASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 HMGB1P48-201ENST00000446155 598 ntBASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 RN7SKP283-201ENST00000517197 270 ntBASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 AC005476.1-201ENST00000554427 397 ntBASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 CKS1BP1-201ENST00000555221 240 ntBASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 NCAPGP2-201ENST00000557911 754 ntBASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 AC074050.1-201ENST00000563247 211 ntBASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 AC099778.2-201ENST00000610904 211 ntBASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 AL356490.1-201ENST00000623079 479 ntBASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 AC083865.1-201ENST00000636634 831 ntBASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 AL513302.2-201ENST00000562313 1842 ntBASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 AC058791.1-201ENST00000608412 3198 ntBASIC3.41□□□□□ -1.86
ECHDC3Q96DC8 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ECHDC3Q96DC8 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.86
ECHDC3Q96DC8 AC007256.1-201ENST00000392253 2765 ntBASIC3.4□□□□□ -1.86
ECHDC3Q96DC8 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
ECHDC3Q96DC8 TNPO1P3-201ENST00000436471 2662 ntBASIC3.4□□□□□ -1.86
ECHDC3Q96DC8 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 RNA5SP197-201ENST00000363357 119 ntBASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 RNA5SP267-201ENST00000364893 126 ntBASIC3.4□□□□□ -1.87
ECHDC3Q96DC8 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms