Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 SNORA17.3-201ENST00000391159 129 ntBASIC1.97□□□□□ -2.09
CSMD3Q7Z407 AL450338.1-201ENST00000407987 512 ntBASIC1.97□□□□□ -2.09
CSMD3Q7Z407 HMGN2P23-201ENST00000456759 269 ntBASIC1.97□□□□□ -2.09
CSMD3Q7Z407 HMGB1P19-201ENST00000517578 577 ntBASIC1.97□□□□□ -2.09
CSMD3Q7Z407 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 OOSP1P2-201ENST00000579644 351 ntBASIC1.97□□□□□ -2.09
CSMD3Q7Z407 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 AC134882.1-201ENST00000603738 1676 ntBASIC1.97□□□□□ -2.09
CSMD3Q7Z407 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 HMGB3P6-201ENST00000444896 598 ntBASIC1.97□□□□□ -2.09
CSMD3Q7Z407 MIR8070-201ENST00000616510 88 ntBASIC1.97□□□□□ -2.09
CSMD3Q7Z407 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 RMST-202ENST00000541282 2099 ntTSL 2 BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 RNA5SP99-201ENST00000364020 114 ntBASIC1.97□□□□□ -2.09
CSMD3Q7Z407 AL356057.3-201ENST00000402607 340 ntBASIC1.97□□□□□ -2.09
CSMD3Q7Z407 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 HNRNPKP5-201ENST00000515300 253 ntBASIC1.97□□□□□ -2.09
CSMD3Q7Z407 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 AC007342.7-201ENST00000624610 2337 ntBASIC1.97□□□□□ -2.09
CSMD3Q7Z407 AL031985.3-201ENST00000565390 2449 ntBASIC1.97□□□□□ -2.09
CSMD3Q7Z407 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC1.97□□□□□ -2.09
CSMD3Q7Z407 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC1.96□□□□□ -2.09
CSMD3Q7Z407 Y_RNA.118-201ENST00000363300 101 ntBASIC1.96□□□□□ -2.09
CSMD3Q7Z407 Y_RNA.508-201ENST00000384502 114 ntBASIC1.96□□□□□ -2.09
CSMD3Q7Z407 RPS29P6-201ENST00000438196 145 ntBASIC1.96□□□□□ -2.09
CSMD3Q7Z407 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC1.96□□□□□ -2.09
CSMD3Q7Z407 AC046143.2-201ENST00000609789 160 ntBASIC1.96□□□□□ -2.09
CSMD3Q7Z407 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.09
CSMD3Q7Z407 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 Y_RNA.164-201ENST00000363709 102 ntBASIC1.96□□□□□ -2.1
CSMD3Q7Z407 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 AC124916.1-201ENST00000444020 547 ntBASIC1.96□□□□□ -2.1
CSMD3Q7Z407 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 RPL5P16-201ENST00000471467 790 ntBASIC1.96□□□□□ -2.1
CSMD3Q7Z407 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 MTND4P2-201ENST00000507767 1203 ntBASIC1.96□□□□□ -2.1
CSMD3Q7Z407 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 AC096644.4-201ENST00000563417 2912 ntBASIC1.96□□□□□ -2.1
CSMD3Q7Z407 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 SETP15-201ENST00000412724 337 ntBASIC1.96□□□□□ -2.1
CSMD3Q7Z407 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 AP000867.2-201ENST00000532468 320 ntBASIC1.96□□□□□ -2.1
CSMD3Q7Z407 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 OR11H5P-201ENST00000554039 926 ntBASIC1.96□□□□□ -2.1
CSMD3Q7Z407 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 PROS2P-201ENST00000474651 1951 ntBASIC1.96□□□□□ -2.1
CSMD3Q7Z407 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 DDX18P3-201ENST00000404856 2007 ntBASIC1.96□□□□□ -2.1
CSMD3Q7Z407 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 OFD1P6Y-202ENST00000451061 2724 ntBASIC1.96□□□□□ -2.1
CSMD3Q7Z407 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CSMD3Q7Z407 AC017007.4-201ENST00000503353 1352 ntBASIC1.96□□□□□ -2.1
CSMD3Q7Z407 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 MTCO1P51-201ENST00000427672 1060 ntBASIC1.95□□□□□ -2.1
CSMD3Q7Z407 AC245517.4-201ENST00000448601 281 ntBASIC1.95□□□□□ -2.1
CSMD3Q7Z407 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 AP001025.2-201ENST00000490908 477 ntBASIC1.95□□□□□ -2.1
CSMD3Q7Z407 AC005921.1-201ENST00000510589 286 ntBASIC1.95□□□□□ -2.1
CSMD3Q7Z407 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 IGHV3-63-201ENST00000518422 341 ntBASIC1.95□□□□□ -2.1
CSMD3Q7Z407 NARSP2-201ENST00000518524 679 ntBASIC1.95□□□□□ -2.1
CSMD3Q7Z407 RMST_8.1-201ENST00000610287 165 ntBASIC1.95□□□□□ -2.1
CSMD3Q7Z407 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 AC244205.2-202ENST00000635781 342 ntBASIC1.95□□□□□ -2.1
CSMD3Q7Z407 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 AL009174.1-201ENST00000426577 416 ntBASIC1.95□□□□□ -2.1
CSMD3Q7Z407 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
CSMD3Q7Z407 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms