Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RNU6-954P-201ENST00000411355 107 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 RN7SKP279-201ENST00000411383 298 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 HMGB3P2-201ENST00000411913 584 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 BX323014.1-201ENST00000412876 237 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.9□□□□□ -1.46
NFKB1P19838 RPL31P45-201ENST00000419532 356 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.9□□□□□ -1.46
NFKB1P19838 AL139396.1-201ENST00000421137 167 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.9□□□□□ -1.46
NFKB1P19838 AL160004.2-201ENST00000432935 350 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 MTND1P9-201ENST00000453775 944 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.9□□□□□ -1.46
NFKB1P19838 RPL35AP28-201ENST00000459730 331 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 RN7SL168P-201ENST00000463821 279 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 Y_RNA.654-201ENST00000497848 106 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 AC026782.1-201ENST00000512952 449 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 AC026801.2-201ENST00000515352 425 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 RNA5SP454-201ENST00000517231 127 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 AC011979.2-201ENST00000527568 352 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.9□□□□□ -1.46
NFKB1P19838 AP002404.1-201ENST00000532005 451 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.9□□□□□ -1.46
NFKB1P19838 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.9□□□□□ -1.46
NFKB1P19838 LSM3P2-201ENST00000551246 273 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 SETP2-201ENST00000553886 926 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.9□□□□□ -1.46
NFKB1P19838 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.9□□□□□ -1.46
NFKB1P19838 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.9□□□□□ -1.46
NFKB1P19838 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
NFKB1P19838 MIR4703-201ENST00000577728 79 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 AC069061.3-201ENST00000582254 823 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.9□□□□□ -1.46
NFKB1P19838 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.9□□□□□ -1.46
NFKB1P19838 AF038458.1-201ENST00000588406 262 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.9□□□□□ -1.46
NFKB1P19838 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 AC244100.1-202ENST00000621554 382 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.9□□□□□ -1.46
NFKB1P19838 CYP3A51P-201ENST00000633513 256 ntBASIC5.9□□□□□ -1.46
NFKB1P19838 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
NFKB1P19838 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
NFKB1P19838 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.9□□□□□ -1.47
NFKB1P19838 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.9□□□□□ -1.47
NFKB1P19838 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NFKB1P19838 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
NFKB1P19838 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NFKB1P19838 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.9□□□□□ -1.47
NFKB1P19838 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.9□□□□□ -1.47
NFKB1P19838 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
NFKB1P19838 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
NFKB1P19838 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
NFKB1P19838 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.89□□□□□ -1.47
NFKB1P19838 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.89□□□□□ -1.47
NFKB1P19838 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NFKB1P19838 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
NFKB1P19838 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NFKB1P19838 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.89□□□□□ -1.47
NFKB1P19838 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
NFKB1P19838 ZNF807-201ENST00000328088 1707 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.89□□□□□ -1.47
NFKB1P19838 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
NFKB1P19838 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NFKB1P19838 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
NFKB1P19838 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NFKB1P19838 SNORD113-7-201ENST00000363762 77 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 Y_RNA.176-201ENST00000363815 109 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 Y_RNA.234-201ENST00000364409 97 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 U3.10-201ENST00000364459 214 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 Y_RNA.378-201ENST00000365652 113 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 SNORD3H-201ENST00000384486 214 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NFKB1P19838 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NFKB1P19838 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NFKB1P19838 MRPL53P1-201ENST00000414323 319 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 AC018865.2-201ENST00000423631 129 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 BX323845.3-201ENST00000428215 527 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NFKB1P19838 AC126120.1-201ENST00000431082 470 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 GAPDHP48-201ENST00000436626 961 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 SUMO2P3-201ENST00000438311 288 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.89□□□□□ -1.47
NFKB1P19838 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.89□□□□□ -1.47
NFKB1P19838 AC104058.1-201ENST00000448028 297 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 AL118520.1-201ENST00000450770 291 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.89□□□□□ -1.47
NFKB1P19838 AC079168.1-201ENST00000458741 345 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 MIR2053-201ENST00000459295 91 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.89□□□□□ -1.47
NFKB1P19838 AC010655.3-201ENST00000478818 450 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 RN7SL741P-201ENST00000482473 289 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 CR383656.1-201ENST00000484916 377 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 RN7SL649P-201ENST00000496974 275 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 TRBVA-201ENST00000498804 316 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.89□□□□□ -1.47
NFKB1P19838 AC116562.3-201ENST00000506136 177 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 MRPS35P2-201ENST00000508242 191 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 AC114781.3-201ENST00000512083 142 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 FTH1P21-201ENST00000512179 511 ntBASIC5.89□□□□□ -1.47
NFKB1P19838 RNU6-1038P-201ENST00000516516 104 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms