Protein–RNA interactions for Protein: P12814

ACTN1, Alpha-actinin-1, humanhuman

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1P12814 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.41□□□□□ -1.7
ACTN1P12814 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.41□□□□□ -1.7
ACTN1P12814 AC006386.1-201ENST00000619436 415 ntBASIC4.41□□□□□ -1.7
ACTN1P12814 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ACTN1P12814 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.41□□□□□ -1.7
ACTN1P12814 AF001550.2-201ENST00000636643 217 ntBASIC4.41□□□□□ -1.7
ACTN1P12814 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ACTN1P12814 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ACTN1P12814 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
ACTN1P12814 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ACTN1P12814 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
ACTN1P12814 AC032011.1-201ENST00000611703 1549 ntBASIC4.41□□□□□ -1.7
ACTN1P12814 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
ACTN1P12814 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
ACTN1P12814 AC099786.3-201ENST00000565735 1410 ntBASIC4.4□□□□□ -1.7
ACTN1P12814 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.4□□□□□ -1.7
ACTN1P12814 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
ACTN1P12814 AC097504.1-201ENST00000515103 2415 ntBASIC4.4□□□□□ -1.7
ACTN1P12814 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ACTN1P12814 RNU6-1242P-201ENST00000391052 103 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 SNORA3.3-201ENST00000408712 125 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 RNA5SP39-201ENST00000411245 120 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 AC004022.2-201ENST00000413824 193 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 AL592310.1-201ENST00000414330 671 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.4□□□□□ -1.71
ACTN1P12814 MTND2P5-201ENST00000432656 1006 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 AC010881.1-201ENST00000433830 235 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 NANOGP2-201ENST00000435391 727 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 EEF1A1P39-201ENST00000440791 250 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 VN1R25P-201ENST00000443385 738 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 HMGB1P16-201ENST00000447155 540 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC4.4□□□□□ -1.71
ACTN1P12814 COX6CP18-201ENST00000448769 222 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC4.4□□□□□ -1.71
ACTN1P12814 VN1R40P-201ENST00000455196 941 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.4□□□□□ -1.71
ACTN1P12814 GAPDHP39-201ENST00000481866 979 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC4.4□□□□□ -1.71
ACTN1P12814 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.4□□□□□ -1.71
ACTN1P12814 AC139783.2-201ENST00000504847 1145 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 HMGN1P11-201ENST00000508668 303 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.4□□□□□ -1.71
ACTN1P12814 AC110792.2-201ENST00000510278 224 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.4□□□□□ -1.71
ACTN1P12814 AC018797.3-201ENST00000513388 1241 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.4□□□□□ -1.71
ACTN1P12814 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.4□□□□□ -1.71
ACTN1P12814 AL161713.1-201ENST00000555538 145 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 EIF5A2P1-201ENST00000564027 460 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 AC023813.2-201ENST00000564321 469 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 AC015726.1-201ENST00000602353 681 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC4.4□□□□□ -1.71
ACTN1P12814 AL139286.1-201ENST00000604465 483 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ACTN1P12814 AC015967.1-201ENST00000619893 476 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
ACTN1P12814 AL357559.1-201ENST00000622228 274 ntBASIC4.4□□□□□ -1.71
ACTN1P12814 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.4□□□□□ -1.71
ACTN1P12814 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.4□□□□□ -1.71
ACTN1P12814 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.4□□□□□ -1.71
ACTN1P12814 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.4□□□□□ -1.71
ACTN1P12814 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.4□□□□□ -1.71
ACTN1P12814 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ACTN1P12814 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.4□□□□□ -1.71
ACTN1P12814 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.4□□□□□ -1.71
ACTN1P12814 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.4□□□□□ -1.71
ACTN1P12814 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
ACTN1P12814 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
ACTN1P12814 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.39□□□□□ -1.71
ACTN1P12814 AC073346.2-201ENST00000624724 2058 ntBASIC4.39□□□□□ -1.71
ACTN1P12814 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.39□□□□□ -1.71
ACTN1P12814 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ACTN1P12814 RNU4-68P-201ENST00000364314 141 ntBASIC4.39□□□□□ -1.71
ACTN1P12814 RNU6-619P-201ENST00000365146 108 ntBASIC4.39□□□□□ -1.71
ACTN1P12814 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.39□□□□□ -1.71
ACTN1P12814 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.39□□□□□ -1.71
ACTN1P12814 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
ACTN1P12814 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
ACTN1P12814 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
ACTN1P12814 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.39□□□□□ -1.71
ACTN1P12814 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.39□□□□□ -1.71
ACTN1P12814 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.39□□□□□ -1.71
ACTN1P12814 NANOGP6-201ENST00000429190 847 ntBASIC4.39□□□□□ -1.71
ACTN1P12814 MTCO1P3-201ENST00000429327 192 ntBASIC4.39□□□□□ -1.71
ACTN1P12814 FTH1P6-201ENST00000430768 320 ntBASIC4.39□□□□□ -1.71
ACTN1P12814 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC4.39□□□□□ -1.71
ACTN1P12814 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.39□□□□□ -1.71
ACTN1P12814 TPTE2P3-201ENST00000441562 1189 ntBASIC4.39□□□□□ -1.71
ACTN1P12814 AL451050.1-201ENST00000450126 415 ntBASIC4.39□□□□□ -1.71
ACTN1P12814 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.39□□□□□ -1.71
ACTN1P12814 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.39□□□□□ -1.71
ACTN1P12814 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.39□□□□□ -1.71
ACTN1P12814 AC020699.1-201ENST00000505161 445 ntBASIC4.39□□□□□ -1.71
ACTN1P12814 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.39□□□□□ -1.71
ACTN1P12814 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.39□□□□□ -1.71
ACTN1P12814 AC093853.1-201ENST00000515689 483 ntBASIC4.39□□□□□ -1.71
ACTN1P12814 SNORA74D-201ENST00000516404 141 ntBASIC4.39□□□□□ -1.71
ACTN1P12814 RNU6-885P-201ENST00000516607 104 ntBASIC4.39□□□□□ -1.71
ACTN1P12814 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.39□□□□□ -1.71
ACTN1P12814 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms