Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC060788.1-201ENST00000521318 469 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM38O00635 OR5AK1P-201ENST00000524837 922 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM38O00635 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM38O00635 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM38O00635 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM38O00635 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.7□□□□□ -1.66
TRIM38O00635 AL512347.1-201ENST00000566420 503 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.7□□□□□ -1.66
TRIM38O00635 AC006362.1-201ENST00000567392 174 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 AL121834.1-201ENST00000572284 509 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM38O00635 AC006270.3-201ENST00000605967 1036 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 RN7SKP299-201ENST00000606679 301 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 AL139286.2-201ENST00000606838 396 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM38O00635 AC105429.2-201ENST00000610567 517 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 AC008083.4-201ENST00000615076 444 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.7□□□□□ -1.66
TRIM38O00635 AC092656.1-203ENST00000624134 423 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 AC007494.3-201ENST00000624660 743 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM38O00635 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.7□□□□□ -1.66
TRIM38O00635 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM38O00635 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
TRIM38O00635 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM38O00635 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRIM38O00635 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
TRIM38O00635 AC130650.2-201ENST00000618736 2403 ntBASIC4.7□□□□□ -1.66
TRIM38O00635 AC008758.3-201ENST00000507003 1829 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM38O00635 MAPK10-303ENST00000641324 3959 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM38O00635 OR51H2P-202ENST00000641424 3046 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM38O00635 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM38O00635 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM38O00635 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM38O00635 MIR129-1-201ENST00000384972 72 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 AC004987.3-201ENST00000413879 771 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 AC009237.10-201ENST00000414112 510 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 AC098592.1-201ENST00000419352 333 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 LINC00993-201ENST00000420453 540 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 AL732292.1-201ENST00000426692 226 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM38O00635 MRPS10P2-201ENST00000431226 381 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.69□□□□□ -1.66
TRIM38O00635 AC098826.1-201ENST00000433943 471 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 AC004938.1-201ENST00000438468 308 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 AC092427.1-201ENST00000439177 601 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 ELOCP8-201ENST00000439309 332 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 ELOCP15-201ENST00000442090 332 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 AC104073.1-201ENST00000451988 151 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 AC092757.1-201ENST00000467293 467 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
TRIM38O00635 AC013356.1-201ENST00000489027 564 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.69□□□□□ -1.66
TRIM38O00635 RNU6-583P-201ENST00000516012 92 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 RNU6-759P-201ENST00000516740 103 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM38O00635 AP004247.1-201ENST00000531556 1289 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
TRIM38O00635 AL110118.1-201ENST00000553543 400 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM38O00635 RPL12P25-202ENST00000598100 674 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 AC073091.2-201ENST00000603205 907 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 AC233280.2-201ENST00000603917 1070 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 AL590392.1-201ENST00000604960 446 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 AP003117.2-201ENST00000606010 545 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 AL121873.1-201ENST00000616013 524 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 AL008636.1-201ENST00000625038 1018 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.69□□□□□ -1.66
TRIM38O00635 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM38O00635 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
TRIM38O00635 AC012020.1-201ENST00000624541 1728 ntBASIC4.69□□□□□ -1.66
TRIM38O00635 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TRIM38O00635 AL079343.1-201ENST00000572358 1771 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM38O00635 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM38O00635 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM38O00635 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TRIM38O00635 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.68□□□□□ -1.66
TRIM38O00635 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM38O00635 RNU1-130P-201ENST00000363930 160 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 SNORA51.6-201ENST00000384151 125 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 RNA5SP372-201ENST00000390836 115 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM38O00635 AL024474.1-201ENST00000404655 591 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
TRIM38O00635 OR8G2P-201ENST00000412796 908 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 RPL21P108-201ENST00000413857 481 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.68□□□□□ -1.66
TRIM38O00635 ATG4AP1-201ENST00000416893 538 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 AL645608.4-201ENST00000423619 154 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 RPEP3-201ENST00000425462 676 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 MTND4P28-201ENST00000426217 387 ntBASIC4.68□□□□□ -1.66
TRIM38O00635 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
TRIM38O00635 RSL24D1P6-201ENST00000426934 401 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms