Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 AL078621.3-201ENST00000623707 2042 ntBASIC4.79□□□□□ -1.64
SEC61A2Q9H9S3 ERCC6-202ENST00000374127 1782 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AC006206.1-201ENST00000544842 3387 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AC073136.1-201ENST00000449426 2884 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AC107021.2-201ENST00000567714 2095 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 RNU1-39P-201ENST00000383897 165 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 RPL23AP32-201ENST00000395315 459 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 RPL7P25-201ENST00000404151 721 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 RNU2-8P-201ENST00000410727 190 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AC019097.1-201ENST00000424783 735 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 RPL35AP12-201ENST00000425362 338 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 PRUNEP1-201ENST00000425846 705 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 RPL12P17-201ENST00000432393 498 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 CFL1P1-202ENST00000432948 411 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 RPS3AP54-201ENST00000435535 734 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 USP9YP15-201ENST00000442391 422 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 RPL7P12-201ENST00000446719 750 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 RPL7P15-201ENST00000461190 712 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AC096576.1-201ENST00000489014 359 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AC108693.1-201ENST00000496068 432 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AC103851.1-201ENST00000506833 274 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 RNU7-30P-201ENST00000516835 62 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AL109766.1-201ENST00000555080 552 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 MIR3671-201ENST00000580455 88 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 MIR4472-2-201ENST00000582069 67 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AL034549.2-201ENST00000618285 3373 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 SCARNA15-201ENST00000607520 4325 ntBASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC4.78□□□□□ -1.64
SEC61A2Q9H9S3 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.78□□□□□ -1.65
SEC61A2Q9H9S3 NUP58P1-201ENST00000502546 1738 ntBASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 LINC01963-201ENST00000562038 3148 ntBASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 RNU5E-1-201ENST00000362477 120 ntBASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 RNU6-223P-201ENST00000362830 107 ntBASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 RNU1-19P-201ENST00000363306 165 ntBASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 RN7SKP162-201ENST00000363605 345 ntBASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 Y_RNA.157-201ENST00000363638 102 ntBASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 Y_RNA.166-201ENST00000363730 102 ntBASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 SNORA51.2-201ENST00000364595 132 ntBASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 SNORA32.2-201ENST00000384049 122 ntBASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 AL162578.1-201ENST00000406202 378 ntBASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 CTSL3P-202ENST00000412179 788 ntBASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 NPM1P40-201ENST00000412758 733 ntBASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 CYCSP6-201ENST00000434498 302 ntBASIC4.77□□□□□ -1.65
SEC61A2Q9H9S3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms