Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.76□□□□□ -1.65
IFT140Q96RY7 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.76□□□□□ -1.65
IFT140Q96RY7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.76□□□□□ -1.65
IFT140Q96RY7 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.76□□□□□ -1.65
IFT140Q96RY7 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
IFT140Q96RY7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
IFT140Q96RY7 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
IFT140Q96RY7 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.76□□□□□ -1.65
IFT140Q96RY7 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.76□□□□□ -1.65
IFT140Q96RY7 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
IFT140Q96RY7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.76□□□□□ -1.65
IFT140Q96RY7 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
IFT140Q96RY7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
IFT140Q96RY7 ZNF603P-201ENST00000405613 487 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.75□□□□□ -1.65
IFT140Q96RY7 RPS12P5-201ENST00000423449 371 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 IFNA11P-201ENST00000446352 526 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 RNA5SP148-201ENST00000516527 94 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 HMGB1P50-201ENST00000605814 607 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.75□□□□□ -1.65
IFT140Q96RY7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.75□□□□□ -1.65
IFT140Q96RY7 GABRG2-229ENST00000641017 3628 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 AC108206.1-201ENST00000570186 4159 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
IFT140Q96RY7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
IFT140Q96RY7 OR52B1P-201ENST00000316506 909 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 MIR30E-201ENST00000362104 92 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 U3.42-201ENST00000408746 214 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.75□□□□□ -1.65
IFT140Q96RY7 BX276092.3-201ENST00000424182 230 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.75□□□□□ -1.65
IFT140Q96RY7 AC104058.1-201ENST00000448028 297 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.75□□□□□ -1.65
IFT140Q96RY7 RNU1-143P-201ENST00000516296 146 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 RN7SKP283-201ENST00000517197 270 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 AC007954.1-201ENST00000554198 494 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 AC027176.1-201ENST00000560204 514 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 U1.23-201ENST00000610293 146 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 RNU1-68P-201ENST00000615382 146 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 RMST_9.1-201ENST00000619945 193 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 U1.39-201ENST00000621562 146 ntBASIC4.75□□□□□ -1.65
IFT140Q96RY7 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
IFT140Q96RY7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
IFT140Q96RY7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
IFT140Q96RY7 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
IFT140Q96RY7 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.74□□□□□ -1.65
IFT140Q96RY7 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
IFT140Q96RY7 ATF1P1-201ENST00000406040 927 ntBASIC4.74□□□□□ -1.65
IFT140Q96RY7 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC4.74□□□□□ -1.65
IFT140Q96RY7 AL121877.1-201ENST00000453704 622 ntBASIC4.74□□□□□ -1.65
IFT140Q96RY7 AC133473.1-201ENST00000455173 299 ntBASIC4.74□□□□□ -1.65
IFT140Q96RY7 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.74□□□□□ -1.65
IFT140Q96RY7 AC019080.5-201ENST00000624891 757 ntBASIC4.74□□□□□ -1.65
IFT140Q96RY7 AC241585.2-209ENST00000638217 143 ntBASIC4.74□□□□□ -1.65
IFT140Q96RY7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
IFT140Q96RY7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
IFT140Q96RY7 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
IFT140Q96RY7 GCNT6-201ENST00000379591 934 ntBASIC4.73□□□□□ -1.65
IFT140Q96RY7 LAP3P1-201ENST00000403648 294 ntBASIC4.73□□□□□ -1.65
IFT140Q96RY7 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.73□□□□□ -1.65
IFT140Q96RY7 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
IFT140Q96RY7 NARSP2-201ENST00000518524 679 ntBASIC4.73□□□□□ -1.65
IFT140Q96RY7 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.73□□□□□ -1.65
IFT140Q96RY7 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
IFT140Q96RY7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
IFT140Q96RY7 MIR592-201ENST00000384959 97 ntBASIC4.72□□□□□ -1.65
IFT140Q96RY7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.72□□□□□ -1.65
IFT140Q96RY7 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
IFT140Q96RY7 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.72□□□□□ -1.65
IFT140Q96RY7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.72□□□□□ -1.65
IFT140Q96RY7 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
IFT140Q96RY7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.72□□□□□ -1.65
IFT140Q96RY7 AC008725.1-201ENST00000605123 2263 ntBASIC4.72□□□□□ -1.65
IFT140Q96RY7 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.72□□□□□ -1.65
IFT140Q96RY7 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
IFT140Q96RY7 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
IFT140Q96RY7 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
IFT140Q96RY7 FAM133CP-201ENST00000332869 704 ntBASIC4.71□□□□□ -1.66
IFT140Q96RY7 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
IFT140Q96RY7 RPS4XP7-201ENST00000406274 780 ntBASIC4.71□□□□□ -1.66
IFT140Q96RY7 UBE2D3P1-201ENST00000436669 444 ntBASIC4.71□□□□□ -1.66
IFT140Q96RY7 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.71□□□□□ -1.66
IFT140Q96RY7 RN7SKP244-201ENST00000516513 307 ntBASIC4.71□□□□□ -1.66
IFT140Q96RY7 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.71□□□□□ -1.66
IFT140Q96RY7 DEFB122-202ENST00000569013 197 ntBASIC4.71□□□□□ -1.66
IFT140Q96RY7 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.71□□□□□ -1.66
IFT140Q96RY7 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC4.71□□□□□ -1.66
IFT140Q96RY7 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.71□□□□□ -1.66
IFT140Q96RY7 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.71□□□□□ -1.66
IFT140Q96RY7 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
IFT140Q96RY7 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
IFT140Q96RY7 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
IFT140Q96RY7 AL049610.1-201ENST00000423374 372 ntBASIC4.7□□□□□ -1.66
IFT140Q96RY7 AL162389.1-201ENST00000449233 177 ntBASIC4.7□□□□□ -1.66
IFT140Q96RY7 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC4.7□□□□□ -1.66
IFT140Q96RY7 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC4.7□□□□□ -1.66
IFT140Q96RY7 AC092608.2-201ENST00000624427 218 ntBASIC4.7□□□□□ -1.66
IFT140Q96RY7 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC4.7□□□□□ -1.66
IFT140Q96RY7 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
IFT140Q96RY7 AC107027.3-201ENST00000565095 3473 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms