Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RPL31P50-201ENST00000471002 296 ntBASIC4.15□□□□□ -1.75
SOX2P48431 AC074386.1-201ENST00000476560 767 ntBASIC4.15□□□□□ -1.75
SOX2P48431 AC138853.1-201ENST00000503549 823 ntBASIC4.15□□□□□ -1.75
SOX2P48431 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX2P48431 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX2P48431 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX2P48431 AC021146.3-201ENST00000511911 260 ntBASIC4.15□□□□□ -1.75
SOX2P48431 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX2P48431 AC022861.1-201ENST00000522981 663 ntBASIC4.15□□□□□ -1.75
SOX2P48431 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.15□□□□□ -1.75
SOX2P48431 OR5AP1P-201ENST00000529730 940 ntBASIC4.15□□□□□ -1.75
SOX2P48431 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.15□□□□□ -1.75
SOX2P48431 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.15□□□□□ -1.75
SOX2P48431 AC016957.1-201ENST00000534895 309 ntBASIC4.15□□□□□ -1.75
SOX2P48431 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.15□□□□□ -1.75
SOX2P48431 AC124068.1-201ENST00000563131 678 ntBASIC4.15□□□□□ -1.75
SOX2P48431 ATP5J2P6-201ENST00000565203 266 ntBASIC4.15□□□□□ -1.75
SOX2P48431 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.15□□□□□ -1.75
SOX2P48431 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.15□□□□□ -1.75
SOX2P48431 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.15□□□□□ -1.75
SOX2P48431 MIR4691-201ENST00000583764 85 ntBASIC4.15□□□□□ -1.75
SOX2P48431 AC022916.3-201ENST00000592961 742 ntBASIC4.15□□□□□ -1.75
SOX2P48431 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.15□□□□□ -1.75
SOX2P48431 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
SOX2P48431 U6atac.1-201ENST00000616025 117 ntBASIC4.15□□□□□ -1.75
SOX2P48431 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC4.15□□□□□ -1.75
SOX2P48431 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.15□□□□□ -1.75
SOX2P48431 AL049767.1-202ENST00000637826 242 ntBASIC4.15□□□□□ -1.75
SOX2P48431 AC099654.12-201ENST00000639868 649 ntBASIC4.15□□□□□ -1.75
SOX2P48431 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
SOX2P48431 AC130650.2-201ENST00000618736 2403 ntBASIC4.15□□□□□ -1.75
SOX2P48431 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SOX2P48431 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SOX2P48431 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
SOX2P48431 AC099654.2-201ENST00000433031 1980 ntBASIC4.14□□□□□ -1.75
SOX2P48431 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SOX2P48431 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
SOX2P48431 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.14□□□□□ -1.75
SOX2P48431 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SOX2P48431 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SOX2P48431 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.14□□□□□ -1.75
SOX2P48431 AC011978.2-201ENST00000569835 2054 ntBASIC4.14□□□□□ -1.75
SOX2P48431 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.14□□□□□ -1.75
SOX2P48431 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
SOX2P48431 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
SOX2P48431 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SOX2P48431 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.14□□□□□ -1.75
SOX2P48431 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SOX2P48431 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.14□□□□□ -1.75
SOX2P48431 OR11H4-201ENST00000315409 1082 ntBASIC4.14□□□□□ -1.75
SOX2P48431 RN7SKP162-201ENST00000363605 345 ntBASIC4.14□□□□□ -1.75
SOX2P48431 RN7SKP160-201ENST00000363804 340 ntBASIC4.14□□□□□ -1.75
SOX2P48431 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SOX2P48431 RNU6-259P-201ENST00000383999 107 ntBASIC4.14□□□□□ -1.75
SOX2P48431 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SOX2P48431 RNU2-21P-201ENST00000410368 188 ntBASIC4.14□□□□□ -1.75
SOX2P48431 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.14□□□□□ -1.75
SOX2P48431 Z97055.1-201ENST00000419730 712 ntBASIC4.14□□□□□ -1.75
SOX2P48431 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.14□□□□□ -1.75
SOX2P48431 MTCYBP5-201ENST00000423752 1135 ntBASIC4.14□□□□□ -1.75
SOX2P48431 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.14□□□□□ -1.75
SOX2P48431 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SOX2P48431 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.14□□□□□ -1.75
SOX2P48431 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.14□□□□□ -1.75
SOX2P48431 PRPF38AP2-201ENST00000438179 851 ntBASIC4.14□□□□□ -1.75
SOX2P48431 AL031667.1-201ENST00000440222 725 ntBASIC4.14□□□□□ -1.75
SOX2P48431 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.14□□□□□ -1.75
SOX2P48431 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.14□□□□□ -1.75
SOX2P48431 AC104073.1-201ENST00000451988 151 ntBASIC4.14□□□□□ -1.75
SOX2P48431 AC005008.1-201ENST00000456151 612 ntBASIC4.14□□□□□ -1.75
SOX2P48431 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.14□□□□□ -1.75
SOX2P48431 RPL23AP56-201ENST00000460778 453 ntBASIC4.14□□□□□ -1.75
SOX2P48431 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.14□□□□□ -1.75
SOX2P48431 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.14□□□□□ -1.75
SOX2P48431 RN7SL222P-201ENST00000476452 299 ntBASIC4.14□□□□□ -1.75
SOX2P48431 LARP1BP2-201ENST00000486594 519 ntBASIC4.14□□□□□ -1.75
SOX2P48431 MRPS33P2-201ENST00000507850 322 ntBASIC4.14□□□□□ -1.75
SOX2P48431 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
SOX2P48431 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.14□□□□□ -1.75
SOX2P48431 AC108064.1-201ENST00000513791 460 ntBASIC4.14□□□□□ -1.75
SOX2P48431 HMGB1P19-201ENST00000517578 577 ntBASIC4.14□□□□□ -1.75
SOX2P48431 COX6CP8-201ENST00000522620 226 ntBASIC4.14□□□□□ -1.75
SOX2P48431 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
SOX2P48431 AC068446.3-201ENST00000555285 382 ntBASIC4.14□□□□□ -1.75
SOX2P48431 RPL21P7-201ENST00000557463 483 ntBASIC4.14□□□□□ -1.75
SOX2P48431 AC009063.1-201ENST00000563342 702 ntBASIC4.14□□□□□ -1.75
SOX2P48431 AC136619.2-201ENST00000563361 631 ntBASIC4.14□□□□□ -1.75
SOX2P48431 AL121834.1-201ENST00000572284 509 ntBASIC4.14□□□□□ -1.75
SOX2P48431 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.14□□□□□ -1.75
SOX2P48431 RN7SL802P-201ENST00000577858 299 ntBASIC4.14□□□□□ -1.75
SOX2P48431 BBIP1P1-201ENST00000602999 279 ntBASIC4.14□□□□□ -1.75
SOX2P48431 MEMO1P5-201ENST00000604810 406 ntBASIC4.14□□□□□ -1.75
SOX2P48431 RBM11P1-201ENST00000604951 799 ntBASIC4.14□□□□□ -1.75
SOX2P48431 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.14□□□□□ -1.75
SOX2P48431 AL512329.2-201ENST00000607350 548 ntBASIC4.14□□□□□ -1.75
SOX2P48431 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.14□□□□□ -1.75
SOX2P48431 AC109347.2-201ENST00000610220 349 ntBASIC4.14□□□□□ -1.75
SOX2P48431 AC131902.3-201ENST00000611767 581 ntBASIC4.14□□□□□ -1.75
SOX2P48431 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
SOX2P48431 AC013476.2-201ENST00000614456 459 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms