Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AP006248.3-201ENST00000623580 594 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 AL590396.2-201ENST00000636511 1041 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 AC007656.2-201ENST00000624902 4547 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 BDP1P-201ENST00000582658 1990 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.9□□□□□ -1.79
CHRNA1P02708 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
CHRNA1P02708 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.9□□□□□ -1.79
CHRNA1P02708 AF127577.6-201ENST00000623352 2191 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CHRNA1P02708 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CHRNA1P02708 AC093908.1-201ENST00000623125 8092 ntBASIC3.9□□□□□ -1.79
CHRNA1P02708 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.9□□□□□ -1.79
CHRNA1P02708 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CHRNA1P02708 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.89□□□□□ -1.79
CHRNA1P02708 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.89□□□□□ -1.79
CHRNA1P02708 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.89□□□□□ -1.79
CHRNA1P02708 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CHRNA1P02708 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CHRNA1P02708 SNORA51.12-201ENST00000384448 134 ntBASIC3.89□□□□□ -1.79
CHRNA1P02708 ATF1P1-201ENST00000406040 927 ntBASIC3.89□□□□□ -1.79
CHRNA1P02708 RNU2-72P-201ENST00000411175 163 ntBASIC3.89□□□□□ -1.79
CHRNA1P02708 AC017079.2-201ENST00000416102 485 ntBASIC3.89□□□□□ -1.79
CHRNA1P02708 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.89□□□□□ -1.79
CHRNA1P02708 VN1R42P-201ENST00000424651 344 ntBASIC3.89□□□□□ -1.79
CHRNA1P02708 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.89□□□□□ -1.79
CHRNA1P02708 AC008065.1-201ENST00000428525 348 ntBASIC3.89□□□□□ -1.79
CHRNA1P02708 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.89□□□□□ -1.79
CHRNA1P02708 RPL17P35-201ENST00000432217 549 ntBASIC3.89□□□□□ -1.79
CHRNA1P02708 ATP5HP2-201ENST00000433885 485 ntBASIC3.89□□□□□ -1.79
CHRNA1P02708 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.89□□□□□ -1.79
CHRNA1P02708 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.89□□□□□ -1.79
CHRNA1P02708 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.89□□□□□ -1.79
CHRNA1P02708 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.89□□□□□ -1.79
CHRNA1P02708 RNU6-1102P-201ENST00000516149 96 ntBASIC3.89□□□□□ -1.79
CHRNA1P02708 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.89□□□□□ -1.79
CHRNA1P02708 AC083923.1-201ENST00000523708 376 ntBASIC3.89□□□□□ -1.79
CHRNA1P02708 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.89□□□□□ -1.79
CHRNA1P02708 AC011611.1-201ENST00000552179 197 ntBASIC3.89□□□□□ -1.79
CHRNA1P02708 YPEL5P2-201ENST00000605553 359 ntBASIC3.89□□□□□ -1.79
CHRNA1P02708 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CHRNA1P02708 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CHRNA1P02708 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.89□□□□□ -1.79
CHRNA1P02708 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CHRNA1P02708 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CHRNA1P02708 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CHRNA1P02708 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CHRNA1P02708 AC024341.1-201ENST00000526444 1552 ntBASIC3.89□□□□□ -1.79
CHRNA1P02708 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CHRNA1P02708 GABPAP-201ENST00000419271 1356 ntBASIC3.89□□□□□ -1.79
CHRNA1P02708 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHRNA1P02708 ENSAP3-201ENST00000312710 333 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC3.88□□□□□ -1.79
CHRNA1P02708 RNU6-1005P-201ENST00000384519 107 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 RNU2-37P-201ENST00000410695 177 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 Z92545.1-201ENST00000411782 234 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.88□□□□□ -1.79
CHRNA1P02708 AC073310.1-201ENST00000423226 1033 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 AL591503.2-201ENST00000442314 1005 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.88□□□□□ -1.79
CHRNA1P02708 HMGB1P48-201ENST00000446155 598 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 AC017099.1-201ENST00000448261 1028 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.88□□□□□ -1.79
CHRNA1P02708 RN7SL807P-201ENST00000470923 297 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 NARSP2-201ENST00000518524 679 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.88□□□□□ -1.79
CHRNA1P02708 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.88□□□□□ -1.79
CHRNA1P02708 AC074029.1-201ENST00000552531 1044 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 AL442163.2-201ENST00000553912 710 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.88□□□□□ -1.79
CHRNA1P02708 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.88□□□□□ -1.79
CHRNA1P02708 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.88□□□□□ -1.79
CHRNA1P02708 ATP5F1P7-201ENST00000567330 760 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 EIF1P6-201ENST00000600054 334 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.88□□□□□ -1.79
CHRNA1P02708 BRDTP1-201ENST00000605735 677 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 RMST_10.1-201ENST00000616309 154 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 MIR6864-201ENST00000617935 70 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 AC073569.3-201ENST00000619055 682 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.88□□□□□ -1.79
CHRNA1P02708 AC091905.1-201ENST00000624400 311 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 U6.98-201ENST00000637157 84 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 AC017104.5-201ENST00000637647 639 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
CHRNA1P02708 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHRNA1P02708 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CHRNA1P02708 SEPT7P7-201ENST00000420492 1301 ntBASIC3.88□□□□□ -1.79
CHRNA1P02708 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CHRNA1P02708 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.87□□□□□ -1.79
CHRNA1P02708 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CHRNA1P02708 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CHRNA1P02708 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CHRNA1P02708 MIR16-2-201ENST00000362117 81 ntBASIC3.87□□□□□ -1.79
CHRNA1P02708 RNU6-1339P-201ENST00000363574 91 ntBASIC3.87□□□□□ -1.79
CHRNA1P02708 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.87□□□□□ -1.79
CHRNA1P02708 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.87□□□□□ -1.79
CHRNA1P02708 BX323014.1-201ENST00000412876 237 ntBASIC3.87□□□□□ -1.79
CHRNA1P02708 AC004987.3-201ENST00000413879 771 ntBASIC3.87□□□□□ -1.79
CHRNA1P02708 OSTCP5-201ENST00000425293 453 ntBASIC3.87□□□□□ -1.79
CHRNA1P02708 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.87□□□□□ -1.79
CHRNA1P02708 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms