Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AP001636.2-201ENST00000525517 696 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 OR5D15P-201ENST00000531671 942 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 AP000619.3-201ENST00000535634 1127 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 HIGD1AP17-201ENST00000554576 276 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 BNIP3P24-201ENST00000593398 557 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 RPP40P2-201ENST00000603596 712 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 AL445423.1-201ENST00000609941 536 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 AL161616.1-201ENST00000611867 286 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 AC120349.2-201ENST00000625002 298 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 AC092184.1-201ENST00000625042 715 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 AC140479.6-201ENST00000633535 357 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 AL133383.2-201ENST00000622958 2336 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 AC010733.2-201ENST00000589496 5702 ntBASIC3.98□□□□□ -1.77
VPS33AQ96AX1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS33AQ96AX1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AL365440.1-201ENST00000436135 2167 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC109315.1-201ENST00000584143 1347 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AP001486.2-201ENST00000561652 5113 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 RNA5SP258-201ENST00000362750 119 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 U3.29-201ENST00000391296 212 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 RN7SKP235-201ENST00000410662 305 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 RNU2-37P-201ENST00000410695 177 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC012065.2-201ENST00000421295 375 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AL356387.2-201ENST00000422272 243 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC013410.2-201ENST00000422627 201 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 RPL23AP1-201ENST00000428990 471 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 MOB1AP1-201ENST00000430903 535 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 NANOGP2-201ENST00000435391 727 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC004854.1-201ENST00000440356 349 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 EEF1A1P39-201ENST00000440791 250 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 MTCO2P25-201ENST00000447065 681 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC007327.1-201ENST00000447461 264 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC011979.1-201ENST00000472300 483 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC092451.1-201ENST00000480211 153 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC068305.1-201ENST00000497406 726 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC108941.1-201ENST00000502853 530 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC114322.1-201ENST00000506771 926 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC005832.3-201ENST00000537929 631 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 TOMM20P2-201ENST00000540082 421 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC011458.1-201ENST00000604034 617 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC013244.1-201ENST00000604279 193 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC016877.3-201ENST00000606778 504 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AP003392.5-201ENST00000607857 415 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AC022509.4-201ENST00000621404 572 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 MIR4278-201ENST00000636094 69 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AL773545.4-201ENST00000637262 310 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 AL513478.4-201ENST00000641636 310 ntBASIC3.97□□□□□ -1.77
VPS33AQ96AX1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VPS33AQ96AX1 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.96□□□□□ -1.77
VPS33AQ96AX1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
VPS33AQ96AX1 AP001350.1-201ENST00000601906 1524 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 OR56B2P-202ENST00000641377 2453 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 FAM3C2-201ENST00000312214 681 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 NACA3P-201ENST00000359690 648 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 PGBD4P8-201ENST00000412993 562 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.96□□□□□ -1.78
VPS33AQ96AX1 AL139128.1-201ENST00000413921 941 ntBASIC3.96□□□□□ -1.78
VPS33AQ96AX1 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms