Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC245166.1-201ENST00000521012 253 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC110741.2-201ENST00000605278 268 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 AC021755.1-201ENST00000559747 1447 ntBASIC0.97□□□□□ -2.25
SYNE1Q8NF91 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC0.97□□□□□ -2.25
SYNE1Q8NF91 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.25
SYNE1Q8NF91 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.25
SYNE1Q8NF91 OR6K4P-201ENST00000423179 955 ntBASIC0.96□□□□□ -2.25
SYNE1Q8NF91 HMGB3P10-201ENST00000434734 572 ntBASIC0.96□□□□□ -2.25
SYNE1Q8NF91 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC0.96□□□□□ -2.25
SYNE1Q8NF91 AC140076.1-201ENST00000449897 361 ntBASIC0.96□□□□□ -2.25
SYNE1Q8NF91 RPL7P47-201ENST00000497299 556 ntBASIC0.96□□□□□ -2.25
SYNE1Q8NF91 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC0.96□□□□□ -2.25
SYNE1Q8NF91 uc_338.1-201ENST00000612113 180 ntBASIC0.96□□□□□ -2.25
SYNE1Q8NF91 AC103858.2-201ENST00000621471 543 ntBASIC0.96□□□□□ -2.25
SYNE1Q8NF91 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC0.96□□□□□ -2.25
SYNE1Q8NF91 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 SYF2-202ENST00000354361 926 ntTSL 2 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 SNORA48.8-201ENST00000391324 134 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 RHEBP3-201ENST00000411920 351 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 RPL37P4-201ENST00000448908 268 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 HMGB3P8-201ENST00000449709 577 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC022431.1-201ENST00000450941 438 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 ACTG1P13-201ENST00000486987 1043 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 LDHBP3-201ENST00000514909 822 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC087888.1-201ENST00000550884 1254 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 DCAF13P3-201ENST00000561147 1334 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 MIR4319-201ENST00000577285 85 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 PRELID3BP8-201ENST00000604148 295 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC007318.2-201ENST00000620999 243 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AP003122.5-201ENST00000527668 3766 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 MRPS31P2-201ENST00000451581 518 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC017037.2-201ENST00000513850 890 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC021733.2-201ENST00000518830 497 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC106734.1-201ENST00000568646 663 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC067852.4-201ENST00000590314 478 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC105227.2-201ENST00000615075 605 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 PAPPA-AS1-201ENST00000445861 2450 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 ATP5F1P6-201ENST00000402768 767 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AIMP1P1-201ENST00000418670 937 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AL031736.2-201ENST00000426573 787 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 RPL31P50-201ENST00000471002 296 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AP002404.1-201ENST00000532005 451 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 RNU6-84P-201ENST00000607737 102 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 MFSD8-233ENST00000641482 4860 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 NFIB-202ENST00000380924 840 ntTSL 5 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 PTP4A1P5-201ENST00000420305 455 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 IL7R-208ENST00000511982 612 ntTSL 2 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 NDUFB9P3-201ENST00000521269 501 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AP001636.2-201ENST00000525517 696 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 EIF4A2P3-201ENST00000525903 1055 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 MIR4716-201ENST00000579628 84 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC079089.3-201ENST00000603094 673 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 DLD-214ENST00000639772 421 ntTSL 5 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC099063.2-201ENST00000446360 662 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 IGKV1OR-3-201ENST00000446944 348 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
SYNE1Q8NF91 RN7SKP244-201ENST00000516513 307 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC109329.2-201ENST00000519658 482 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 OR4R3P-201ENST00000525084 838 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC079600.2-201ENST00000550076 130 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 MIR4435-1-201ENST00000582552 80 ntBASIC0.96□□□□□ -2.26
SYNE1Q8NF91 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms