Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC025125.1-201ENST00000624743 1922 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 AF127577.6-201ENST00000623352 2191 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 AC090337.1-201ENST00000579651 2074 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 AC016716.1-201ENST00000265882 708 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 RN7SKP263-201ENST00000411194 309 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 MTND4P15-201ENST00000437913 1033 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 RN7SL594P-201ENST00000470590 287 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 AC023598.1-201ENST00000472521 361 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 TMED11P-201ENST00000479478 690 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 AP000563.1-201ENST00000490865 758 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 RNU2-58P-201ENST00000516403 183 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 SNORA64.4-201ENST00000516632 81 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 SNORA70.18-201ENST00000516696 98 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 MTND2P26-201ENST00000528255 1029 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 AC026333.2-201ENST00000542164 106 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 MIR4697-201ENST00000582977 78 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 VN1R85P-201ENST00000601587 426 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 AC125494.3-201ENST00000602759 455 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 AL391497.1-201ENST00000608671 547 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 RMST_10.1-201ENST00000616309 154 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 U4.6-201ENST00000621618 127 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 AC024595.1-201ENST00000623088 387 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 AC007823.1-201ENST00000569932 1566 ntBASIC3.68□□□□□ -1.82
CCDC50Q8IVM0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 FRG1CP-201ENST00000358464 769 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 RNU6-792P-201ENST00000363490 107 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 U8.11-201ENST00000384699 133 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 U8.12-201ENST00000384701 133 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 MIR153-1-201ENST00000384914 90 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 AC007066.1-201ENST00000392902 381 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 RNU4-27P-201ENST00000410889 139 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 RN7SKP53-201ENST00000411337 315 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 DBIP2-201ENST00000419076 262 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 AP000907.1-201ENST00000428428 510 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 ELOCP6-201ENST00000429066 328 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 AL512661.1-201ENST00000434586 1253 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 AC009969.1-201ENST00000438726 172 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 AL357552.1-201ENST00000445254 415 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 HMGB1P48-201ENST00000446155 598 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 ELOCP12-201ENST00000458706 328 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 U8.18-201ENST00000459285 133 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 SNRPGP3-201ENST00000469405 227 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 AC126121.1-201ENST00000482313 553 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 UBE2CP3-201ENST00000502715 450 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 MTND4LP31-201ENST00000514859 294 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 RANP9-201ENST00000519957 271 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 STMN1P1-201ENST00000617809 440 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 AC110801.1-201ENST00000623590 212 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 NMD3P1-201ENST00000439704 1488 ntBASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
CCDC50Q8IVM0 MTND4P8-201ENST00000514997 1362 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 NSRP1P1-201ENST00000444067 1693 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 SNORD9-201ENST00000362566 104 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 RNA5SP51-201ENST00000364750 119 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 PRRC2CP1-201ENST00000404428 159 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 AC092745.2-202ENST00000411880 369 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 AL513174.1-201ENST00000423182 629 ntBASIC3.66□□□□□ -1.82
CCDC50Q8IVM0 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms