Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 RPS20P22-201ENST00000473700 357 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 RPL36AP21-201ENST00000490372 323 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 AC099506.2-201ENST00000623074 221 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 RNA5SP31-201ENST00000411144 127 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 RPL7P8-201ENST00000411964 730 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 RPS26P40-201ENST00000435209 294 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 AL162389.1-201ENST00000449233 177 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 ANP32BP2-201ENST00000454525 545 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 AP000859.1-201ENST00000525536 307 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 AC018690.1-201ENST00000608144 626 ntBASIC2.02□□□□□ -2.09
CSMD3Q7Z407 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC2.02□□□□□ -2.09
CSMD3Q7Z407 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 ATF1P1-201ENST00000406040 927 ntBASIC2.01□□□□□ -2.09
CSMD3Q7Z407 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 RN7SL499P-201ENST00000481141 276 ntBASIC2.01□□□□□ -2.09
CSMD3Q7Z407 SYT14P1-201ENST00000481459 721 ntBASIC2.01□□□□□ -2.09
CSMD3Q7Z407 AC117522.3-201ENST00000507974 584 ntBASIC2.01□□□□□ -2.09
CSMD3Q7Z407 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 MIR4648-201ENST00000580107 72 ntBASIC2.01□□□□□ -2.09
CSMD3Q7Z407 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 MIR4727-201ENST00000622232 55 ntBASIC2.01□□□□□ -2.09
CSMD3Q7Z407 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 AP002088.1-201ENST00000382740 395 ntBASIC2.01□□□□□ -2.09
CSMD3Q7Z407 HMGB3P18-201ENST00000406327 590 ntBASIC2.01□□□□□ -2.09
CSMD3Q7Z407 AC005351.1-201ENST00000511152 786 ntBASIC2.01□□□□□ -2.09
CSMD3Q7Z407 RFPL4AP3-201ENST00000515267 345 ntBASIC2.01□□□□□ -2.09
CSMD3Q7Z407 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 AL021368.2-201ENST00000606125 5352 ntBASIC2.01□□□□□ -2.09
CSMD3Q7Z407 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 HMGB1P16-201ENST00000447155 540 ntBASIC2.01□□□□□ -2.09
CSMD3Q7Z407 AC114781.4-201ENST00000513707 639 ntBASIC2.01□□□□□ -2.09
CSMD3Q7Z407 RNA5SP24-201ENST00000516478 95 ntBASIC2.01□□□□□ -2.09
CSMD3Q7Z407 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.01□□□□□ -2.09
CSMD3Q7Z407 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2□□□□□ -2.09
CSMD3Q7Z407 NCAPGP1-201ENST00000505112 1814 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2□□□□□ -2.09
CSMD3Q7Z407 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CSMD3Q7Z407 U8.2-201ENST00000363156 134 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC2□□□□□ -2.09
CSMD3Q7Z407 RPS4XP7-201ENST00000406274 780 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 VTA1P1-201ENST00000414044 866 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 RN7SKP210-201ENST00000459176 261 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 AC010401.1-201ENST00000463867 348 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2□□□□□ -2.09
CSMD3Q7Z407 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC2□□□□□ -2.09
CSMD3Q7Z407 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2□□□□□ -2.09
CSMD3Q7Z407 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC2□□□□□ -2.09
CSMD3Q7Z407 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CSMD3Q7Z407 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
CSMD3Q7Z407 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC2□□□□□ -2.09
CSMD3Q7Z407 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2□□□□□ -2.09
CSMD3Q7Z407 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
CSMD3Q7Z407 AC008079.2-201ENST00000623543 20396 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 RPL7P26-201ENST00000333817 754 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 Y_RNA.140-201ENST00000363474 103 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 Y_RNA.595-201ENST00000410403 105 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 NPM1P24-201ENST00000428039 894 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC2□□□□□ -2.09
CSMD3Q7Z407 MRPS31P2-201ENST00000451581 518 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 RPL9P32-201ENST00000464118 620 ntBASIC2□□□□□ -2.09
CSMD3Q7Z407 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2□□□□□ -2.09
CSMD3Q7Z407 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC2□□□□□ -2.09
CSMD3Q7Z407 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2□□□□□ -2.09
CSMD3Q7Z407 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms