Protein–RNA interactions for Protein: Q5VWJ9

SNX30, Sorting nexin-30, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30Q5VWJ9 S100A11P1-201ENST00000477525 312 ntBASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 AC110760.3-202ENST00000515177 371 ntBASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 MIR2116-201ENST00000517221 80 ntBASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 OR5M7P-201ENST00000526140 972 ntBASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 BNIP3P5-201ENST00000562290 498 ntBASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 AC107982.3-201ENST00000584957 985 ntBASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 MIR4760-201ENST00000585040 80 ntBASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 BNIP3P26-201ENST00000600827 554 ntBASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 AC091946.2-201ENST00000606105 291 ntBASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 AL159169.3-201ENST00000608871 561 ntBASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 AC004825.2-201ENST00000616634 455 ntBASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 ZYXP1-201ENST00000617638 118 ntBASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 AC006065.5-201ENST00000623427 349 ntBASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 AP001002.2-201ENST00000625137 386 ntBASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SNX30Q5VWJ9 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
SNX30Q5VWJ9 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SNX30Q5VWJ9 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
SNX30Q5VWJ9 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SNX30Q5VWJ9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 RNU5D-1-201ENST00000363299 116 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AL355379.1-201ENST00000405542 640 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 OR8G2P-201ENST00000412796 908 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 MTCYBP24-201ENST00000420387 1106 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 RPL7P44-201ENST00000424827 742 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 RPS6P12-201ENST00000432491 726 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 Z80107.1-201ENST00000436830 412 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 TMEM248P1-201ENST00000510579 951 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 RNU4-60P-201ENST00000517239 135 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AC105233.3-201ENST00000531125 744 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AC005832.3-201ENST00000537929 631 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AC138915.2-201ENST00000569776 97 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AL355812.1-201ENST00000603215 216 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AC083899.3-201ENST00000603413 594 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AC067959.1-201ENST00000604334 379 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AC233309.1-201ENST00000619522 751 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AC010608.2-201ENST00000624830 470 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 CDR1-202ENST00000625883 1485 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AC008725.1-201ENST00000605123 2263 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AC018555.1-201ENST00000567548 1980 ntBASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SNX30Q5VWJ9 AC010300.1-201ENST00000600671 5134 ntBASIC4.39□□□□□ -1.71
SNX30Q5VWJ9 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SNX30Q5VWJ9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX30Q5VWJ9 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNX30Q5VWJ9 AC097504.1-201ENST00000515103 2415 ntBASIC4.39□□□□□ -1.71
SNX30Q5VWJ9 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
SNX30Q5VWJ9 RNA5SP479-201ENST00000364858 117 ntBASIC4.39□□□□□ -1.71
SNX30Q5VWJ9 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SNX30Q5VWJ9 MIR1179-201ENST00000408703 91 ntBASIC4.39□□□□□ -1.71
SNX30Q5VWJ9 RNU2-42P-201ENST00000410697 113 ntBASIC4.39□□□□□ -1.71
SNX30Q5VWJ9 RN7SKP263-201ENST00000411194 309 ntBASIC4.39□□□□□ -1.71
SNX30Q5VWJ9 LUZP4P1-201ENST00000415420 344 ntBASIC4.39□□□□□ -1.71
SNX30Q5VWJ9 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.39□□□□□ -1.71
SNX30Q5VWJ9 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX30Q5VWJ9 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.39□□□□□ -1.71
SNX30Q5VWJ9 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
SNX30Q5VWJ9 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SNX30Q5VWJ9 AC104073.1-201ENST00000451988 151 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms