Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LIM2P55344 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
LIM2P55344 RPS4XP5-202ENST00000449995 1334 ntBASIC3.44□□□□□ -1.86
LIM2P55344 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.44□□□□□ -1.86
LIM2P55344 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LIM2P55344 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
LIM2P55344 AL133412.1-201ENST00000380194 2992 ntBASIC3.43□□□□□ -1.86
LIM2P55344 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.43□□□□□ -1.86
LIM2P55344 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.43□□□□□ -1.86
LIM2P55344 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.43□□□□□ -1.86
LIM2P55344 RNU6-353P-201ENST00000364266 108 ntBASIC3.43□□□□□ -1.86
LIM2P55344 RNU6-619P-201ENST00000365146 108 ntBASIC3.43□□□□□ -1.86
LIM2P55344 Z98941.1-201ENST00000407764 100 ntBASIC3.43□□□□□ -1.86
LIM2P55344 ATP5A1P2-201ENST00000412323 255 ntBASIC3.43□□□□□ -1.86
LIM2P55344 RAB9AP3-201ENST00000412737 573 ntBASIC3.43□□□□□ -1.86
LIM2P55344 AMD1P2-201ENST00000412936 992 ntBASIC3.43□□□□□ -1.86
LIM2P55344 LIPT1P1-201ENST00000415870 1186 ntBASIC3.43□□□□□ -1.86
LIM2P55344 RPL31P45-201ENST00000419532 356 ntBASIC3.43□□□□□ -1.86
LIM2P55344 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.43□□□□□ -1.86
LIM2P55344 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.43□□□□□ -1.86
LIM2P55344 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.43□□□□□ -1.86
LIM2P55344 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.43□□□□□ -1.86
LIM2P55344 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
LIM2P55344 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.43□□□□□ -1.86
LIM2P55344 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.43□□□□□ -1.86
LIM2P55344 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.43□□□□□ -1.86
LIM2P55344 RPS3AP46-201ENST00000448352 682 ntBASIC3.43□□□□□ -1.86
LIM2P55344 HMGN1P5-201ENST00000448591 263 ntBASIC3.43□□□□□ -1.86
LIM2P55344 RAB9AP1-201ENST00000449393 573 ntBASIC3.43□□□□□ -1.86
LIM2P55344 RNU7-140P-201ENST00000459546 60 ntBASIC3.43□□□□□ -1.86
LIM2P55344 RPL21P103-201ENST00000479921 488 ntBASIC3.43□□□□□ -1.86
LIM2P55344 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.43□□□□□ -1.86
LIM2P55344 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.43□□□□□ -1.86
LIM2P55344 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.43□□□□□ -1.86
LIM2P55344 AC118282.2-201ENST00000508739 374 ntBASIC3.43□□□□□ -1.86
LIM2P55344 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.43□□□□□ -1.86
LIM2P55344 RNU1-95P-201ENST00000516357 160 ntBASIC3.43□□□□□ -1.86
LIM2P55344 RNU1-128P-201ENST00000516704 160 ntBASIC3.43□□□□□ -1.86
LIM2P55344 AC023632.4-201ENST00000517783 191 ntBASIC3.43□□□□□ -1.86
LIM2P55344 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.43□□□□□ -1.86
LIM2P55344 RANP9-201ENST00000519957 271 ntBASIC3.43□□□□□ -1.86
LIM2P55344 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.43□□□□□ -1.86
LIM2P55344 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.43□□□□□ -1.86
LIM2P55344 PTP4A1P6-201ENST00000531034 478 ntBASIC3.43□□□□□ -1.86
LIM2P55344 AC004217.3-201ENST00000551552 878 ntBASIC3.43□□□□□ -1.86
LIM2P55344 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.43□□□□□ -1.86
LIM2P55344 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.43□□□□□ -1.86
LIM2P55344 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.43□□□□□ -1.86
LIM2P55344 MIR4666A-201ENST00000580160 79 ntBASIC3.43□□□□□ -1.86
LIM2P55344 AC025946.2-201ENST00000603398 234 ntBASIC3.43□□□□□ -1.86
LIM2P55344 AC002487.1-201ENST00000604565 994 ntBASIC3.43□□□□□ -1.86
LIM2P55344 RNU6-1192P-201ENST00000612197 107 ntBASIC3.43□□□□□ -1.86
LIM2P55344 RNU6-489P-201ENST00000618289 107 ntBASIC3.43□□□□□ -1.86
LIM2P55344 AL356118.1-201ENST00000635272 1078 ntBASIC3.43□□□□□ -1.86
LIM2P55344 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.43□□□□□ -1.86
LIM2P55344 BX649567.1-201ENST00000642071 1134 ntBASIC3.43□□□□□ -1.86
LIM2P55344 AL732372.2-225ENST00000642124 456 ntBASIC3.43□□□□□ -1.86
LIM2P55344 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.43□□□□□ -1.86
LIM2P55344 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
LIM2P55344 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
LIM2P55344 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LIM2P55344 DBF4P1-201ENST00000412976 1892 ntBASIC3.43□□□□□ -1.86
LIM2P55344 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
LIM2P55344 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.43□□□□□ -1.86
LIM2P55344 ZNF285B-201ENST00000561698 1767 ntBASIC3.43□□□□□ -1.86
LIM2P55344 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LIM2P55344 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
LIM2P55344 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.42□□□□□ -1.86
LIM2P55344 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
LIM2P55344 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.42□□□□□ -1.86
LIM2P55344 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.42□□□□□ -1.86
LIM2P55344 MTND4P8-201ENST00000514997 1362 ntBASIC3.42□□□□□ -1.86
LIM2P55344 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
LIM2P55344 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
LIM2P55344 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
LIM2P55344 AL138878.1-201ENST00000405131 347 ntBASIC3.42□□□□□ -1.86
LIM2P55344 AC008280.1-201ENST00000418851 412 ntBASIC3.42□□□□□ -1.86
LIM2P55344 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.42□□□□□ -1.86
LIM2P55344 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.42□□□□□ -1.86
LIM2P55344 AC018644.1-201ENST00000429934 551 ntBASIC3.42□□□□□ -1.86
LIM2P55344 HMGB1P45-201ENST00000435986 653 ntBASIC3.42□□□□□ -1.86
LIM2P55344 CDC27P1-201ENST00000445384 715 ntBASIC3.42□□□□□ -1.86
LIM2P55344 RPL23AP15-201ENST00000450202 459 ntBASIC3.42□□□□□ -1.86
LIM2P55344 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.42□□□□□ -1.86
LIM2P55344 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.42□□□□□ -1.86
LIM2P55344 HMGN3P1-201ENST00000453847 193 ntBASIC3.42□□□□□ -1.86
LIM2P55344 AC146507.1-201ENST00000468335 354 ntBASIC3.42□□□□□ -1.86
LIM2P55344 PRDX3P4-201ENST00000470828 747 ntBASIC3.42□□□□□ -1.86
LIM2P55344 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.42□□□□□ -1.86
LIM2P55344 RPS3AP50-201ENST00000487064 803 ntBASIC3.42□□□□□ -1.86
LIM2P55344 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.42□□□□□ -1.86
LIM2P55344 AC008427.1-201ENST00000503102 655 ntBASIC3.42□□□□□ -1.86
LIM2P55344 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.42□□□□□ -1.86
LIM2P55344 AC021146.1-201ENST00000511202 716 ntBASIC3.42□□□□□ -1.86
LIM2P55344 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.42□□□□□ -1.86
LIM2P55344 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.42□□□□□ -1.86
LIM2P55344 OR8K4P-201ENST00000534608 872 ntBASIC3.42□□□□□ -1.86
LIM2P55344 AC092851.1-201ENST00000535964 478 ntBASIC3.42□□□□□ -1.86
LIM2P55344 CYB5AP5-201ENST00000549779 389 ntBASIC3.42□□□□□ -1.86
LIM2P55344 GTF2IP22-201ENST00000554443 182 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms