Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
MMP3P08254 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
MMP3P08254 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
MMP3P08254 Z99496.1-201ENST00000469424 1477 ntBASIC4.48□□□□□ -1.69
MMP3P08254 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
MMP3P08254 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.48□□□□□ -1.69
MMP3P08254 AP000776.1-201ENST00000530032 1663 ntBASIC4.48□□□□□ -1.69
MMP3P08254 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
MMP3P08254 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.47□□□□□ -1.69
MMP3P08254 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
MMP3P08254 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
MMP3P08254 AC106871.1-201ENST00000568324 3102 ntBASIC4.47□□□□□ -1.69
MMP3P08254 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
MMP3P08254 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.47□□□□□ -1.69
MMP3P08254 OR4A15-201ENST00000314706 1035 ntBASIC4.47□□□□□ -1.69
MMP3P08254 RNU6-560P-201ENST00000364007 108 ntBASIC4.47□□□□□ -1.69
MMP3P08254 RPL17P50-201ENST00000396131 546 ntBASIC4.47□□□□□ -1.69
MMP3P08254 VN1R8P-201ENST00000407739 893 ntBASIC4.47□□□□□ -1.69
MMP3P08254 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.47□□□□□ -1.69
MMP3P08254 RN7SKP156-201ENST00000410308 342 ntBASIC4.47□□□□□ -1.69
MMP3P08254 RAB9AP3-201ENST00000412737 573 ntBASIC4.47□□□□□ -1.69
MMP3P08254 PGBD4P8-201ENST00000412993 562 ntBASIC4.47□□□□□ -1.69
MMP3P08254 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.47□□□□□ -1.69
MMP3P08254 AC009302.1-201ENST00000417147 390 ntBASIC4.47□□□□□ -1.69
MMP3P08254 AC090960.1-201ENST00000421072 306 ntBASIC4.47□□□□□ -1.69
MMP3P08254 MRPS36P1-201ENST00000421291 307 ntBASIC4.47□□□□□ -1.69
MMP3P08254 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.47□□□□□ -1.69
MMP3P08254 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.47□□□□□ -1.69
MMP3P08254 SKP1P3-201ENST00000429280 487 ntBASIC4.47□□□□□ -1.69
MMP3P08254 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.47□□□□□ -1.69
MMP3P08254 MTND4P32-201ENST00000437189 1237 ntBASIC4.47□□□□□ -1.69
MMP3P08254 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
MMP3P08254 RPL7P59-201ENST00000447700 943 ntBASIC4.47□□□□□ -1.69
MMP3P08254 RAB9AP1-201ENST00000449393 573 ntBASIC4.47□□□□□ -1.69
MMP3P08254 AL133477.1-201ENST00000457472 514 ntBASIC4.47□□□□□ -1.69
MMP3P08254 ACTR3P3-201ENST00000480448 893 ntBASIC4.47□□□□□ -1.69
MMP3P08254 AC048346.1-201ENST00000510247 144 ntBASIC4.47□□□□□ -1.69
MMP3P08254 RNU6-885P-201ENST00000516607 104 ntBASIC4.47□□□□□ -1.69
MMP3P08254 AC008694.2-201ENST00000517591 306 ntBASIC4.47□□□□□ -1.69
MMP3P08254 NDUFA5P2-201ENST00000519723 344 ntBASIC4.47□□□□□ -1.69
MMP3P08254 MTCO1P47-201ENST00000523889 1271 ntBASIC4.47□□□□□ -1.69
MMP3P08254 AP001317.1-201ENST00000531194 960 ntBASIC4.47□□□□□ -1.69
MMP3P08254 AC022882.1-201ENST00000532142 501 ntBASIC4.47□□□□□ -1.69
MMP3P08254 AC100770.1-201ENST00000532310 322 ntBASIC4.47□□□□□ -1.69
MMP3P08254 AP000619.3-201ENST00000535634 1127 ntBASIC4.47□□□□□ -1.69
MMP3P08254 CYCSP30-201ENST00000546447 172 ntBASIC4.47□□□□□ -1.69
MMP3P08254 ELOCP32-201ENST00000548625 324 ntBASIC4.47□□□□□ -1.69
MMP3P08254 AC004217.3-201ENST00000551552 878 ntBASIC4.47□□□□□ -1.69
MMP3P08254 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.47□□□□□ -1.69
MMP3P08254 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.47□□□□□ -1.69
MMP3P08254 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.47□□□□□ -1.69
MMP3P08254 AP003973.1-201ENST00000604639 691 ntBASIC4.47□□□□□ -1.69
MMP3P08254 AC091167.4-201ENST00000605079 184 ntBASIC4.47□□□□□ -1.69
MMP3P08254 AP004247.3-201ENST00000608682 624 ntBASIC4.47□□□□□ -1.69
MMP3P08254 VIS1.1-201ENST00000610517 203 ntBASIC4.47□□□□□ -1.69
MMP3P08254 AC023158.2-201ENST00000614876 543 ntBASIC4.47□□□□□ -1.69
MMP3P08254 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.47□□□□□ -1.69
MMP3P08254 AC121761.2-201ENST00000617300 689 ntBASIC4.47□□□□□ -1.69
MMP3P08254 AC068620.4-201ENST00000636730 1182 ntBASIC4.47□□□□□ -1.69
MMP3P08254 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
MMP3P08254 LINC01109-201ENST00000603837 3081 ntBASIC4.47□□□□□ -1.69
MMP3P08254 AC009313.2-201ENST00000417893 1941 ntBASIC4.46□□□□□ -1.69
MMP3P08254 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.69
MMP3P08254 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
MMP3P08254 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
MMP3P08254 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
MMP3P08254 AC046144.1-201ENST00000478559 1853 ntBASIC4.46□□□□□ -1.7
MMP3P08254 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
MMP3P08254 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
MMP3P08254 AP000526.1-201ENST00000603308 1388 ntBASIC4.46□□□□□ -1.7
MMP3P08254 OR52B1P-201ENST00000316506 909 ntBASIC4.46□□□□□ -1.7
MMP3P08254 RNU6-839P-201ENST00000363347 108 ntBASIC4.46□□□□□ -1.7
MMP3P08254 Y_RNA.333-201ENST00000365274 102 ntBASIC4.46□□□□□ -1.7
MMP3P08254 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
MMP3P08254 MIR217-201ENST00000384817 110 ntBASIC4.46□□□□□ -1.7
MMP3P08254 MIR449B-201ENST00000384995 97 ntBASIC4.46□□□□□ -1.7
MMP3P08254 RNU2-42P-201ENST00000410697 113 ntBASIC4.46□□□□□ -1.7
MMP3P08254 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.46□□□□□ -1.7
MMP3P08254 CRYBB2P1-203ENST00000415709 538 ntBASIC4.46□□□□□ -1.7
MMP3P08254 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.46□□□□□ -1.7
MMP3P08254 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.46□□□□□ -1.7
MMP3P08254 AC069157.1-201ENST00000421749 137 ntBASIC4.46□□□□□ -1.7
MMP3P08254 UBE2V1P1-201ENST00000430836 445 ntBASIC4.46□□□□□ -1.7
MMP3P08254 AL445567.1-201ENST00000439121 144 ntBASIC4.46□□□□□ -1.7
MMP3P08254 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.46□□□□□ -1.7
MMP3P08254 RAB11AP1-201ENST00000442978 646 ntBASIC4.46□□□□□ -1.7
MMP3P08254 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.46□□□□□ -1.7
MMP3P08254 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.46□□□□□ -1.7
MMP3P08254 AC082651.2-201ENST00000496833 166 ntBASIC4.46□□□□□ -1.7
MMP3P08254 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.46□□□□□ -1.7
MMP3P08254 AC104090.1-201ENST00000506341 1171 ntBASIC4.46□□□□□ -1.7
MMP3P08254 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
MMP3P08254 AC008494.2-201ENST00000514544 370 ntBASIC4.46□□□□□ -1.7
MMP3P08254 RNU6-759P-201ENST00000516740 103 ntBASIC4.46□□□□□ -1.7
MMP3P08254 AC087808.1-201ENST00000520501 361 ntBASIC4.46□□□□□ -1.7
MMP3P08254 AC008562.1-201ENST00000521763 330 ntBASIC4.46□□□□□ -1.7
MMP3P08254 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.46□□□□□ -1.7
MMP3P08254 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.46□□□□□ -1.7
MMP3P08254 PDCD5P1-201ENST00000543528 309 ntBASIC4.46□□□□□ -1.7
MMP3P08254 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 159.2 ms