Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL161637.1-201ENST00000622380 412 ntBASIC5.76□□□□□ -1.49
PDGFAP04085 AL353662.3-201ENST00000625131 237 ntBASIC5.76□□□□□ -1.49
PDGFAP04085 AC073488.3-201ENST00000631611 778 ntBASIC5.76□□□□□ -1.49
PDGFAP04085 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFAP04085 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFAP04085 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.76□□□□□ -1.49
PDGFAP04085 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFAP04085 BDP1P-201ENST00000582658 1990 ntBASIC5.76□□□□□ -1.49
PDGFAP04085 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
PDGFAP04085 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.76□□□□□ -1.49
PDGFAP04085 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.76□□□□□ -1.49
PDGFAP04085 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PDGFAP04085 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
PDGFAP04085 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.76□□□□□ -1.49
PDGFAP04085 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.76□□□□□ -1.49
PDGFAP04085 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFAP04085 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PDGFAP04085 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
PDGFAP04085 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PDGFAP04085 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFAP04085 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFAP04085 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFAP04085 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFAP04085 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
PDGFAP04085 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFAP04085 AL442639.1-201ENST00000625030 1899 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 Z95114.1-201ENST00000624264 14574 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
PDGFAP04085 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFAP04085 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFAP04085 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFAP04085 AC090229.1-201ENST00000590983 1609 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 AC004656.1-201ENST00000568479 4951 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 AP005435.3-201ENST00000531260 3198 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 OR5P1P-201ENST00000299512 925 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PDGFAP04085 Y_RNA.187-201ENST00000363918 113 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 RNU6-82P-201ENST00000363970 107 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 Y_RNA.197-201ENST00000364004 102 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 RNU5E-6P-201ENST00000365574 115 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 SNORD51-201ENST00000384320 80 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 RNU1-46P-201ENST00000384425 164 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 DBIP1-201ENST00000401435 260 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 RN7SKP158-201ENST00000410453 326 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 RNU6-370P-201ENST00000411008 104 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 RNU6-516P-201ENST00000411381 104 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.75□□□□□ -1.49
PDGFAP04085 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFAP04085 AL139396.1-201ENST00000421137 167 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.75□□□□□ -1.49
PDGFAP04085 RPL36AP39-201ENST00000445859 318 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 AL031584.1-201ENST00000447169 754 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 AC093166.4-201ENST00000457867 318 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 AC023141.9-201ENST00000458734 412 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 SNORD97-201ENST00000459187 142 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 AC004801.2-202ENST00000463559 283 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 AC053481.1-201ENST00000467217 306 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFAP04085 RN7SL717P-201ENST00000478343 297 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 RN7SL193P-201ENST00000491708 276 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFAP04085 TRBVA-201ENST00000498804 316 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 AC083906.1-201ENST00000509298 406 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 AC017037.2-201ENST00000513850 890 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 RNU6-27P-201ENST00000516146 107 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 RNU6-64P-201ENST00000517119 105 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.75□□□□□ -1.49
PDGFAP04085 AP003396.4-201ENST00000527574 265 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.75□□□□□ -1.49
PDGFAP04085 RPA2P1-201ENST00000556557 721 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.75□□□□□ -1.49
PDGFAP04085 SNORD95-201ENST00000579879 68 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.75□□□□□ -1.49
PDGFAP04085 XIAPP1-201ENST00000603162 600 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 AL591167.1-201ENST00000607321 456 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 MIR6826-201ENST00000617808 98 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFAP04085 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFAP04085 AC091925.2-201ENST00000625059 256 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 AC055839.1-201ENST00000634467 498 ntBASIC5.75□□□□□ -1.49
PDGFAP04085 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFAP04085 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PDGFAP04085 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFAP04085 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PDGFAP04085 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.75□□□□□ -1.49
PDGFAP04085 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFAP04085 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFAP04085 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PDGFAP04085 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.75□□□□□ -1.49
PDGFAP04085 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PDGFAP04085 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.75□□□□□ -1.49
PDGFAP04085 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.74□□□□□ -1.49
PDGFAP04085 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFAP04085 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFAP04085 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
PDGFAP04085 AP001284.1-201ENST00000528393 2118 ntBASIC5.74□□□□□ -1.49
PDGFAP04085 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFAP04085 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFAP04085 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PDGFAP04085 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms