Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 AL161912.4-201ENST00000623889 2468 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 RAD17P2-201ENST00000451754 1977 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 Y_RNA.22-201ENST00000362492 102 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 ELOCP20-201ENST00000422460 345 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 GSTA6P-201ENST00000424144 582 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 AC113412.1-201ENST00000425840 504 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 AL451062.2-201ENST00000427515 271 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 AC068287.1-201ENST00000430283 295 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 AC019185.1-201ENST00000442718 389 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 RNU7-182P-201ENST00000459009 62 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 RPS15AP17-201ENST00000470598 390 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 RN7SL41P-201ENST00000476144 297 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 RPS4XP23-201ENST00000487801 237 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 AP001025.2-201ENST00000490908 477 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 TMEM251P1-201ENST00000503717 318 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 AC022447.4-201ENST00000504053 364 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 HIGD1AP13-201ENST00000509878 289 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 UBE2CP1-201ENST00000557130 554 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 AC084783.1-201ENST00000565846 910 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 AC004832.4-201ENST00000608952 331 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 AC008785.1-201ENST00000624475 456 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 AC068724.3-201ENST00000625906 87 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 AC138627.1-203ENST00000641872 1680 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 MRE11P1-201ENST00000464884 2127 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 OR55B1P-203ENST00000641518 2602 ntBASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 FOXJ3-209ENST00000545068 5165 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
COL25A1Q9BXS0 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 RNU6-212P-201ENST00000362642 104 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 RNU6-853P-201ENST00000364306 107 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 RNU6-744P-201ENST00000365557 107 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 SNORD14.1-201ENST00000365609 90 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 RNU6-1316P-201ENST00000384242 108 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 Y_RNA.473-201ENST00000384333 102 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 EIF4E2P1-201ENST00000393781 255 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 AC008171.1-201ENST00000395058 200 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 Y_RNA.594-201ENST00000410373 140 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 RPL21P24-201ENST00000413752 448 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 AC108032.1-201ENST00000416706 207 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 SNAP23P1-201ENST00000433229 246 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 AC079922.1-201ENST00000443291 359 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 DEFA11P-201ENST00000446470 261 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 AC016027.4-201ENST00000450866 277 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 AC133473.1-201ENST00000455173 299 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 RPS14P8-201ENST00000478778 369 ntBASIC6.09□□□□□ -1.43
COL25A1Q9BXS0 AC114728.1-201ENST00000488289 483 ntBASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms