Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 REG4-204ENST00000530654 612 ntTSL 5 BASIC7.78□□□□□ -1.16
CD44P16070 ATP5J2P4-201ENST00000538774 267 ntBASIC7.78□□□□□ -1.16
CD44P16070 C16orf62-224ENST00000567245 573 ntTSL 5 BASIC7.78□□□□□ -1.16
CD44P16070 ACTG1P15-201ENST00000570019 1063 ntBASIC7.78□□□□□ -1.16
CD44P16070 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC7.78□□□□□ -1.16
CD44P16070 AC087893.2-201ENST00000623272 255 ntBASIC7.78□□□□□ -1.16
CD44P16070 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CD44P16070 MIR3658-201ENST00000636291 56 ntBASIC7.78□□□□□ -1.16
CD44P16070 AC068647.2-201ENST00000637380 353 ntBASIC7.78□□□□□ -1.16
CD44P16070 AC011471.4-201ENST00000638271 216 ntBASIC7.78□□□□□ -1.16
CD44P16070 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CD44P16070 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CD44P16070 USP3-201ENST00000268049 5311 ntTSL 5 BASIC7.78□□□□□ -1.16
CD44P16070 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CD44P16070 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CD44P16070 CTNNA1P1-201ENST00000515849 2728 ntBASIC7.78□□□□□ -1.16
CD44P16070 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC7.78□□□□□ -1.16
CD44P16070 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
CD44P16070 CLCA3P-203ENST00000490028 2781 ntBASIC7.77□□□□□ -1.16
CD44P16070 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.77□□□□□ -1.17
CD44P16070 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
CD44P16070 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.17
CD44P16070 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CD44P16070 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CD44P16070 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CD44P16070 KCNMB3P1-202ENST00000493696 3389 ntBASIC7.77□□□□□ -1.17
CD44P16070 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
CD44P16070 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CD44P16070 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CD44P16070 Y_RNA.217-201ENST00000364214 105 ntBASIC7.77□□□□□ -1.17
CD44P16070 Y_RNA.446-201ENST00000384178 104 ntBASIC7.77□□□□□ -1.17
CD44P16070 RAN-201ENST00000392367 780 ntTSL 5 BASIC7.77□□□□□ -1.17
CD44P16070 AC116036.1-201ENST00000412199 367 ntBASIC7.77□□□□□ -1.17
CD44P16070 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC7.77□□□□□ -1.17
CD44P16070 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC7.77□□□□□ -1.17
CD44P16070 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC7.77□□□□□ -1.17
CD44P16070 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CD44P16070 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC7.77□□□□□ -1.17
CD44P16070 PTMAP6-201ENST00000439110 327 ntBASIC7.77□□□□□ -1.17
CD44P16070 AC234775.1-201ENST00000454247 670 ntBASIC7.77□□□□□ -1.17
CD44P16070 RN7SKP210-201ENST00000459176 261 ntBASIC7.77□□□□□ -1.17
CD44P16070 Y_RNA.641-201ENST00000459414 105 ntBASIC7.77□□□□□ -1.17
CD44P16070 RN7SL815P-201ENST00000470970 290 ntBASIC7.77□□□□□ -1.17
CD44P16070 UBA52P7-201ENST00000486088 380 ntBASIC7.77□□□□□ -1.17
CD44P16070 RPL23AP40-201ENST00000487630 390 ntBASIC7.77□□□□□ -1.17
CD44P16070 RN7SL182P-201ENST00000496499 300 ntBASIC7.77□□□□□ -1.17
CD44P16070 IGKV1OR2-1-201ENST00000514060 354 ntBASIC7.77□□□□□ -1.17
CD44P16070 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC7.77□□□□□ -1.17
CD44P16070 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC7.77□□□□□ -1.17
CD44P16070 SNORA70D-201ENST00000578836 135 ntBASIC7.77□□□□□ -1.17
CD44P16070 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC7.77□□□□□ -1.17
CD44P16070 IGKV1OR2-118-201ENST00000603238 347 ntBASIC7.77□□□□□ -1.17
CD44P16070 AC111186.1-201ENST00000604684 130 ntBASIC7.77□□□□□ -1.17
CD44P16070 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC7.77□□□□□ -1.17
CD44P16070 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC7.77□□□□□ -1.17
CD44P16070 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
CD44P16070 AL596211.1-201ENST00000569873 2277 ntBASIC7.77□□□□□ -1.17
CD44P16070 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CD44P16070 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CD44P16070 AC087516.1-201ENST00000561236 2428 ntBASIC7.77□□□□□ -1.17
CD44P16070 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CD44P16070 KIAA0100-201ENST00000389003 6852 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
CD44P16070 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 HMGB1-203ENST00000341423 5485 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 AOX3P-204ENST00000491025 2107 ntBASIC7.76□□□□□ -1.17
CD44P16070 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.76□□□□□ -1.17
CD44P16070 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
CD44P16070 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
CD44P16070 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 Y_RNA.172-201ENST00000363765 102 ntBASIC7.76□□□□□ -1.17
CD44P16070 RNU6-275P-201ENST00000364910 107 ntBASIC7.76□□□□□ -1.17
CD44P16070 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
CD44P16070 SNORA40.19-201ENST00000390846 128 ntBASIC7.76□□□□□ -1.17
CD44P16070 SNORA12.2-201ENST00000391040 156 ntBASIC7.76□□□□□ -1.17
CD44P16070 RN7SKP114-201ENST00000410327 279 ntBASIC7.76□□□□□ -1.17
CD44P16070 AC109638.1-201ENST00000417406 326 ntBASIC7.76□□□□□ -1.17
CD44P16070 NDUFB4P7-201ENST00000423198 363 ntBASIC7.76□□□□□ -1.17
CD44P16070 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC7.76□□□□□ -1.17
CD44P16070 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC7.76□□□□□ -1.17
CD44P16070 RPL21P40-201ENST00000428586 483 ntBASIC7.76□□□□□ -1.17
CD44P16070 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CD44P16070 AL604028.2-201ENST00000437848 788 ntBASIC7.76□□□□□ -1.17
CD44P16070 PPIAP3-201ENST00000450588 505 ntBASIC7.76□□□□□ -1.17
CD44P16070 AL133351.3-201ENST00000454998 193 ntBASIC7.76□□□□□ -1.17
CD44P16070 RN7SL705P-201ENST00000481678 294 ntBASIC7.76□□□□□ -1.17
CD44P16070 RN7SL647P-201ENST00000485429 300 ntBASIC7.76□□□□□ -1.17
CD44P16070 RNU7-110P-201ENST00000516891 62 ntBASIC7.76□□□□□ -1.17
CD44P16070 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC7.76□□□□□ -1.17
CD44P16070 PRPF19P1-201ENST00000584766 898 ntBASIC7.76□□□□□ -1.17
CD44P16070 AC087575.1-201ENST00000585087 229 ntBASIC7.76□□□□□ -1.17
CD44P16070 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC7.76□□□□□ -1.17
CD44P16070 AC006329.2-201ENST00000611491 394 ntBASIC7.76□□□□□ -1.17
CD44P16070 MIR6762-201ENST00000613340 86 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms