Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.98□□□□□ -1.93
VCANP13611 AC008638.3-201ENST00000603341 463 ntBASIC2.98□□□□□ -1.93
VCANP13611 AL139395.1-201ENST00000603662 160 ntBASIC2.98□□□□□ -1.93
VCANP13611 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
VCANP13611 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC2.98□□□□□ -1.93
VCANP13611 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
VCANP13611 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
VCANP13611 AC126124.2-201ENST00000413542 321 ntBASIC2.98□□□□□ -1.93
VCANP13611 RPL21P109-201ENST00000422213 475 ntBASIC2.98□□□□□ -1.93
VCANP13611 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC2.98□□□□□ -1.93
VCANP13611 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.98□□□□□ -1.93
VCANP13611 AC023043.2-201ENST00000589678 1026 ntBASIC2.98□□□□□ -1.93
VCANP13611 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.98□□□□□ -1.93
VCANP13611 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
VCANP13611 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
VCANP13611 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC2.97□□□□□ -1.93
VCANP13611 CR381670.1-201ENST00000624291 1693 ntBASIC2.97□□□□□ -1.93
VCANP13611 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.97□□□□□ -1.93
VCANP13611 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
VCANP13611 AC002075.2-201ENST00000425207 252 ntBASIC2.97□□□□□ -1.93
VCANP13611 ELOCP18-201ENST00000434209 337 ntBASIC2.97□□□□□ -1.93
VCANP13611 NDUFA5P4-201ENST00000436704 385 ntBASIC2.97□□□□□ -1.93
VCANP13611 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.97□□□□□ -1.93
VCANP13611 AC099560.2-201ENST00000457554 255 ntBASIC2.97□□□□□ -1.93
VCANP13611 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.97□□□□□ -1.93
VCANP13611 RNU1-143P-201ENST00000516296 146 ntBASIC2.97□□□□□ -1.93
VCANP13611 RAD21-204ENST00000518055 896 ntTSL 2 BASIC2.97□□□□□ -1.93
VCANP13611 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.97□□□□□ -1.93
VCANP13611 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.97□□□□□ -1.93
VCANP13611 MIR5047-201ENST00000579212 100 ntBASIC2.97□□□□□ -1.93
VCANP13611 U1.23-201ENST00000610293 146 ntBASIC2.97□□□□□ -1.93
VCANP13611 RNU1-68P-201ENST00000615382 146 ntBASIC2.97□□□□□ -1.93
VCANP13611 U1.39-201ENST00000621562 146 ntBASIC2.97□□□□□ -1.93
VCANP13611 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC2.97□□□□□ -1.93
VCANP13611 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.97□□□□□ -1.93
VCANP13611 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.97□□□□□ -1.93
VCANP13611 SNRPGP9-201ENST00000456025 225 ntBASIC2.97□□□□□ -1.93
VCANP13611 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC2.97□□□□□ -1.93
VCANP13611 CTSLP2-204ENST00000629029 392 ntBASIC2.97□□□□□ -1.93
VCANP13611 HSPA8P1-201ENST00000425843 1833 ntBASIC2.97□□□□□ -1.93
VCANP13611 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC2.97□□□□□ -1.93
VCANP13611 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC2.97□□□□□ -1.93
VCANP13611 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VCANP13611 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC2.97□□□□□ -1.93
VCANP13611 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.97□□□□□ -1.93
VCANP13611 AC069499.1-201ENST00000489433 509 ntBASIC2.97□□□□□ -1.93
VCANP13611 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
VCANP13611 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC2.96□□□□□ -1.93
VCANP13611 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
VCANP13611 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
VCANP13611 ARL4AP1-201ENST00000503220 705 ntBASIC2.96□□□□□ -1.94
VCANP13611 NDUFA5P6-201ENST00000542110 379 ntBASIC2.96□□□□□ -1.94
VCANP13611 AC010198.2-201ENST00000550612 259 ntBASIC2.96□□□□□ -1.94
VCANP13611 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.96□□□□□ -1.94
VCANP13611 DPRXP4-201ENST00000578053 568 ntBASIC2.96□□□□□ -1.94
VCANP13611 AC007938.3-201ENST00000604965 623 ntBASIC2.96□□□□□ -1.94
VCANP13611 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
VCANP13611 MIR93-201ENST00000385024 80 ntBASIC2.96□□□□□ -1.94
VCANP13611 AL137014.1-201ENST00000420490 1226 ntBASIC2.96□□□□□ -1.94
VCANP13611 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.96□□□□□ -1.94
VCANP13611 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.96□□□□□ -1.94
VCANP13611 RPS3AP50-201ENST00000487064 803 ntBASIC2.96□□□□□ -1.94
VCANP13611 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.96□□□□□ -1.94
VCANP13611 AC093673.2-201ENST00000609674 331 ntBASIC2.96□□□□□ -1.94
VCANP13611 AL359715.4-201ENST00000606629 1436 ntBASIC2.96□□□□□ -1.94
VCANP13611 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VCANP13611 HMGN2P8-201ENST00000391458 268 ntBASIC2.95□□□□□ -1.94
VCANP13611 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.95□□□□□ -1.94
VCANP13611 CST9LP2-201ENST00000437612 320 ntBASIC2.95□□□□□ -1.94
VCANP13611 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.95□□□□□ -1.94
VCANP13611 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VCANP13611 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.95□□□□□ -1.94
VCANP13611 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.95□□□□□ -1.94
VCANP13611 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC2.95□□□□□ -1.94
VCANP13611 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VCANP13611 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC2.95□□□□□ -1.94
VCANP13611 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
VCANP13611 RNU6-618P-201ENST00000363518 112 ntBASIC2.95□□□□□ -1.94
VCANP13611 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.95□□□□□ -1.94
VCANP13611 RN7SKP282-201ENST00000516824 299 ntBASIC2.95□□□□□ -1.94
VCANP13611 AC106785.3-201ENST00000564064 847 ntBASIC2.95□□□□□ -1.94
VCANP13611 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.95□□□□□ -1.94
VCANP13611 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.95□□□□□ -1.94
VCANP13611 AL669942.2-201ENST00000620352 697 ntBASIC2.95□□□□□ -1.94
VCANP13611 AC090897.3-201ENST00000636973 1157 ntBASIC2.95□□□□□ -1.94
VCANP13611 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
VCANP13611 AC087190.4-201ENST00000574616 8334 ntBASIC2.95□□□□□ -1.94
VCANP13611 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.95□□□□□ -1.94
VCANP13611 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.95□□□□□ -1.94
VCANP13611 TRAV11-201ENST00000539512 339 ntBASIC2.95□□□□□ -1.94
VCANP13611 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VCANP13611 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.95□□□□□ -1.94
VCANP13611 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VCANP13611 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC2.95□□□□□ -1.94
VCANP13611 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.95□□□□□ -1.94
VCANP13611 AC138965.3-201ENST00000623875 498 ntBASIC2.95□□□□□ -1.94
VCANP13611 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VCANP13611 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.95□□□□□ -1.94
VCANP13611 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
VCANP13611 OR4G1P-202ENST00000641173 1788 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms