Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
VSIG8P0DPA2 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC5.75□□□□□ -1.49
VSIG8P0DPA2 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AC009643.2-201ENST00000603543 1448 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AC005332.9-201ENST00000620266 2921 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 RNU6-188P-201ENST00000364207 107 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 MIR19A-201ENST00000384878 82 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 SNORA16.2-201ENST00000390991 127 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AL023284.3-201ENST00000407767 334 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 SNORA11D-201ENST00000408548 128 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 SNORA11E-201ENST00000408778 128 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 RNA5SP178-201ENST00000410380 128 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 RPL23AP36-201ENST00000413895 458 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 UBE2V1P13-201ENST00000436983 439 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 CEACAMP9-201ENST00000442990 513 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AL356133.1-201ENST00000444762 372 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 HMGN3P1-201ENST00000453847 193 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 RPL23AP81-201ENST00000455252 467 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AC084198.1-201ENST00000477747 402 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AL161747.1-201ENST00000480068 358 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AC092824.1-201ENST00000483524 576 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 SNRPCP11-201ENST00000492453 205 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AC083906.1-201ENST00000509298 406 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 RFPL4AP3-201ENST00000515267 345 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 Y_RNA.687-201ENST00000516558 91 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 C14orf159-213ENST00000519019 834 ntTSL 3 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 RANP3-201ENST00000530970 276 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AC036111.2-201ENST00000533247 901 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AC093227.2-201ENST00000589357 285 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AC005520.5-201ENST00000613926 164 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 DLEU1_1.1-201ENST00000618107 190 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 RBBP8P1-201ENST00000449447 1844 ntBASIC5.74□□□□□ -1.49
VSIG8P0DPA2 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VSIG8P0DPA2 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VSIG8P0DPA2 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
VSIG8P0DPA2 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VSIG8P0DPA2 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.73□□□□□ -1.49
VSIG8P0DPA2 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VSIG8P0DPA2 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.73□□□□□ -1.49
VSIG8P0DPA2 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VSIG8P0DPA2 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC5.73□□□□□ -1.49
VSIG8P0DPA2 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VSIG8P0DPA2 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VSIG8P0DPA2 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
VSIG8P0DPA2 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VSIG8P0DPA2 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
VSIG8P0DPA2 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
VSIG8P0DPA2 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.73□□□□□ -1.49
VSIG8P0DPA2 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.73□□□□□ -1.49
VSIG8P0DPA2 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.73□□□□□ -1.49
VSIG8P0DPA2 RN7SKP118-201ENST00000364331 330 ntBASIC5.73□□□□□ -1.49
VSIG8P0DPA2 Y_RNA.233-201ENST00000364407 101 ntBASIC5.73□□□□□ -1.49
VSIG8P0DPA2 RNU6-1325P-201ENST00000364905 105 ntBASIC5.73□□□□□ -1.49
VSIG8P0DPA2 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.73□□□□□ -1.49
VSIG8P0DPA2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
VSIG8P0DPA2 RNU6-131P-201ENST00000391144 107 ntBASIC5.73□□□□□ -1.49
VSIG8P0DPA2 RNA5SP53-201ENST00000391299 120 ntBASIC5.73□□□□□ -1.49
VSIG8P0DPA2 AC016769.3-201ENST00000396562 315 ntBASIC5.73□□□□□ -1.49
VSIG8P0DPA2 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
VSIG8P0DPA2 RN7SKP296-201ENST00000411185 341 ntBASIC5.73□□□□□ -1.49
VSIG8P0DPA2 RNU6-387P-201ENST00000411331 105 ntBASIC5.73□□□□□ -1.49
VSIG8P0DPA2 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms