Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SSX4O60224 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSX4O60224 EIF2AP4-201ENST00000424793 1781 ntBASIC3.94□□□□□ -1.78
SSX4O60224 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.94□□□□□ -1.78
SSX4O60224 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSX4O60224 AC027287.1-201ENST00000553115 1453 ntBASIC3.94□□□□□ -1.78
SSX4O60224 RAD17P1-201ENST00000418130 2042 ntBASIC3.94□□□□□ -1.78
SSX4O60224 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSX4O60224 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSX4O60224 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.94□□□□□ -1.78
SSX4O60224 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.94□□□□□ -1.78
SSX4O60224 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SSX4O60224 RNU1-63P-201ENST00000383902 164 ntBASIC3.94□□□□□ -1.78
SSX4O60224 SNORA70E-201ENST00000384492 135 ntBASIC3.94□□□□□ -1.78
SSX4O60224 MIR506-201ENST00000384998 124 ntBASIC3.94□□□□□ -1.78
SSX4O60224 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSX4O60224 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.94□□□□□ -1.78
SSX4O60224 AL133384.1-201ENST00000412744 351 ntBASIC3.94□□□□□ -1.78
SSX4O60224 AC006960.1-201ENST00000419980 153 ntBASIC3.94□□□□□ -1.78
SSX4O60224 AC005005.2-201ENST00000420779 380 ntBASIC3.94□□□□□ -1.78
SSX4O60224 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.94□□□□□ -1.78
SSX4O60224 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSX4O60224 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.94□□□□□ -1.78
SSX4O60224 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.94□□□□□ -1.78
SSX4O60224 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSX4O60224 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.94□□□□□ -1.78
SSX4O60224 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.94□□□□□ -1.78
SSX4O60224 MTND3P1-201ENST00000441336 220 ntBASIC3.94□□□□□ -1.78
SSX4O60224 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.94□□□□□ -1.78
SSX4O60224 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC3.94□□□□□ -1.78
SSX4O60224 AC104073.1-201ENST00000451988 151 ntBASIC3.94□□□□□ -1.78
SSX4O60224 AC010618.1-201ENST00000469924 477 ntBASIC3.94□□□□□ -1.78
SSX4O60224 RPL21P126-201ENST00000470049 478 ntBASIC3.94□□□□□ -1.78
SSX4O60224 PARP4P3-201ENST00000510265 317 ntBASIC3.94□□□□□ -1.78
SSX4O60224 AC007016.1-201ENST00000512110 244 ntBASIC3.94□□□□□ -1.78
SSX4O60224 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.94□□□□□ -1.78
SSX4O60224 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.94□□□□□ -1.78
SSX4O60224 PDCL2P2-201ENST00000533651 189 ntBASIC3.94□□□□□ -1.78
SSX4O60224 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.94□□□□□ -1.78
SSX4O60224 AC092470.1-201ENST00000546187 132 ntBASIC3.94□□□□□ -1.78
SSX4O60224 HIGD1AP17-201ENST00000554576 276 ntBASIC3.94□□□□□ -1.78
SSX4O60224 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.94□□□□□ -1.78
SSX4O60224 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SSX4O60224 AP001180.3-201ENST00000582221 145 ntBASIC3.94□□□□□ -1.78
SSX4O60224 HMGB2P1-201ENST00000591146 634 ntBASIC3.94□□□□□ -1.78
SSX4O60224 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.94□□□□□ -1.78
SSX4O60224 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SSX4O60224 AC020910.2-201ENST00000603635 610 ntBASIC3.94□□□□□ -1.78
SSX4O60224 AC007566.2-201ENST00000603642 413 ntBASIC3.94□□□□□ -1.78
SSX4O60224 AC009220.3-201ENST00000604318 586 ntBASIC3.94□□□□□ -1.78
SSX4O60224 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.94□□□□□ -1.78
SSX4O60224 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.94□□□□□ -1.78
SSX4O60224 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.94□□□□□ -1.78
SSX4O60224 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSX4O60224 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSX4O60224 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
SSX4O60224 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSX4O60224 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SSX4O60224 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
SSX4O60224 SNORD113-6-201ENST00000363345 75 ntBASIC3.93□□□□□ -1.78
SSX4O60224 RNU6-1214P-201ENST00000363650 109 ntBASIC3.93□□□□□ -1.78
SSX4O60224 RNA5SP479-201ENST00000364858 117 ntBASIC3.93□□□□□ -1.78
SSX4O60224 Y_RNA.311-201ENST00000365068 96 ntBASIC3.93□□□□□ -1.78
SSX4O60224 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
SSX4O60224 RNU6-157P-201ENST00000383957 107 ntBASIC3.93□□□□□ -1.78
SSX4O60224 MIR153-1-201ENST00000384914 90 ntBASIC3.93□□□□□ -1.78
SSX4O60224 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
SSX4O60224 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.93□□□□□ -1.78
SSX4O60224 JKAMPP1-201ENST00000413804 919 ntBASIC3.93□□□□□ -1.78
SSX4O60224 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.93□□□□□ -1.78
SSX4O60224 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.93□□□□□ -1.78
SSX4O60224 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.93□□□□□ -1.78
SSX4O60224 PSMA2P3-201ENST00000429685 675 ntBASIC3.93□□□□□ -1.78
SSX4O60224 FTH1P6-201ENST00000430768 320 ntBASIC3.93□□□□□ -1.78
SSX4O60224 KCTD10P1-201ENST00000434203 625 ntBASIC3.93□□□□□ -1.78
SSX4O60224 EXTL2P1-201ENST00000446218 416 ntBASIC3.93□□□□□ -1.78
SSX4O60224 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.93□□□□□ -1.78
SSX4O60224 AC098826.2-201ENST00000452011 651 ntBASIC3.93□□□□□ -1.78
SSX4O60224 AL645939.1-201ENST00000453429 797 ntBASIC3.93□□□□□ -1.78
SSX4O60224 TRBV26-201ENST00000456572 344 ntBASIC3.93□□□□□ -1.78
SSX4O60224 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.93□□□□□ -1.78
SSX4O60224 AC090142.1-201ENST00000465776 462 ntBASIC3.93□□□□□ -1.78
SSX4O60224 AL136126.1-201ENST00000473603 402 ntBASIC3.93□□□□□ -1.78
SSX4O60224 AC104090.1-201ENST00000506341 1171 ntBASIC3.93□□□□□ -1.78
SSX4O60224 HMGB1P28-201ENST00000507778 552 ntBASIC3.93□□□□□ -1.78
SSX4O60224 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.93□□□□□ -1.78
SSX4O60224 CDV3-208ENST00000511392 554 ntTSL 5 BASIC3.93□□□□□ -1.78
SSX4O60224 AC010587.2-201ENST00000511727 448 ntBASIC3.93□□□□□ -1.78
SSX4O60224 HIGD1AP3-201ENST00000515857 278 ntBASIC3.93□□□□□ -1.78
SSX4O60224 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.93□□□□□ -1.78
SSX4O60224 OR5M7P-201ENST00000526140 972 ntBASIC3.93□□□□□ -1.78
SSX4O60224 OR4A45P-201ENST00000529954 901 ntBASIC3.93□□□□□ -1.78
SSX4O60224 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SSX4O60224 OR4A12P-201ENST00000530847 918 ntBASIC3.93□□□□□ -1.78
SSX4O60224 SLC2A13P1-201ENST00000531560 322 ntBASIC3.93□□□□□ -1.78
SSX4O60224 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.93□□□□□ -1.78
SSX4O60224 AC125611.1-201ENST00000549563 229 ntBASIC3.93□□□□□ -1.78
SSX4O60224 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.93□□□□□ -1.78
SSX4O60224 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.93□□□□□ -1.78
SSX4O60224 AC087465.1-201ENST00000560574 245 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms