Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC127526.1-201ENST00000417526 366 ntBASIC5.9□□□□□ -1.46
SOX1O00570 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.9□□□□□ -1.46
SOX1O00570 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.9□□□□□ -1.46
SOX1O00570 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.9□□□□□ -1.46
SOX1O00570 DUTP6-201ENST00000425573 462 ntBASIC5.9□□□□□ -1.46
SOX1O00570 AC234779.1-201ENST00000425910 285 ntBASIC5.9□□□□□ -1.46
SOX1O00570 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC5.9□□□□□ -1.46
SOX1O00570 AC104651.2-201ENST00000447549 528 ntBASIC5.9□□□□□ -1.46
SOX1O00570 TCEA1P1-201ENST00000449716 880 ntBASIC5.9□□□□□ -1.46
SOX1O00570 MTCO2P29-201ENST00000465212 189 ntBASIC5.9□□□□□ -1.46
SOX1O00570 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.9□□□□□ -1.46
SOX1O00570 MIR2117-201ENST00000516780 80 ntBASIC5.9□□□□□ -1.46
SOX1O00570 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.9□□□□□ -1.46
SOX1O00570 SUB1P1-201ENST00000524415 382 ntBASIC5.9□□□□□ -1.46
SOX1O00570 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.9□□□□□ -1.46
SOX1O00570 AC024940.3-201ENST00000538551 316 ntBASIC5.9□□□□□ -1.46
SOX1O00570 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.9□□□□□ -1.46
SOX1O00570 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.9□□□□□ -1.46
SOX1O00570 AC103710.3-201ENST00000608157 948 ntBASIC5.9□□□□□ -1.46
SOX1O00570 AC074101.1-201ENST00000637861 241 ntBASIC5.9□□□□□ -1.46
SOX1O00570 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SOX1O00570 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SOX1O00570 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.47
SOX1O00570 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SOX1O00570 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.9□□□□□ -1.47
SOX1O00570 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
SOX1O00570 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SOX1O00570 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.9□□□□□ -1.47
SOX1O00570 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
SOX1O00570 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.89□□□□□ -1.47
SOX1O00570 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SOX1O00570 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SOX1O00570 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SOX1O00570 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.89□□□□□ -1.47
SOX1O00570 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.89□□□□□ -1.47
SOX1O00570 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
SOX1O00570 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SOX1O00570 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SOX1O00570 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.89□□□□□ -1.47
SOX1O00570 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SOX1O00570 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.89□□□□□ -1.47
SOX1O00570 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.89□□□□□ -1.47
SOX1O00570 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.89□□□□□ -1.47
SOX1O00570 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SOX1O00570 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.89□□□□□ -1.47
SOX1O00570 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SOX1O00570 OR5P1P-201ENST00000299512 925 ntBASIC5.89□□□□□ -1.47
SOX1O00570 MIR369-201ENST00000362155 70 ntBASIC5.89□□□□□ -1.47
SOX1O00570 RNU6-853P-201ENST00000364306 107 ntBASIC5.89□□□□□ -1.47
SOX1O00570 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SOX1O00570 AL078604.1-201ENST00000404609 466 ntBASIC5.89□□□□□ -1.47
SOX1O00570 RPL5P18-201ENST00000406671 891 ntBASIC5.89□□□□□ -1.47
SOX1O00570 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SOX1O00570 NDUFB4P5-201ENST00000415445 361 ntBASIC5.89□□□□□ -1.47
SOX1O00570 AC234781.4-201ENST00000419384 244 ntBASIC5.89□□□□□ -1.47
SOX1O00570 AL645937.1-202ENST00000421799 937 ntBASIC5.89□□□□□ -1.47
SOX1O00570 BEND7P1-201ENST00000422058 457 ntBASIC5.89□□□□□ -1.47
SOX1O00570 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SOX1O00570 AC018630.2-202ENST00000422992 927 ntBASIC5.89□□□□□ -1.47
SOX1O00570 AC006946.1-201ENST00000429106 328 ntBASIC5.89□□□□□ -1.47
SOX1O00570 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.89□□□□□ -1.47
SOX1O00570 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.89□□□□□ -1.47
SOX1O00570 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC5.89□□□□□ -1.47
SOX1O00570 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.89□□□□□ -1.47
SOX1O00570 DDX3P2-201ENST00000446138 111 ntBASIC5.89□□□□□ -1.47
SOX1O00570 AC079781.2-201ENST00000446424 169 ntBASIC5.89□□□□□ -1.47
SOX1O00570 SLC25A18P1-201ENST00000449385 454 ntBASIC5.89□□□□□ -1.47
SOX1O00570 AL356010.1-201ENST00000456364 102 ntBASIC5.89□□□□□ -1.47
SOX1O00570 PPP1R2P5-201ENST00000457256 603 ntBASIC5.89□□□□□ -1.47
SOX1O00570 AC027575.1-201ENST00000481064 460 ntBASIC5.89□□□□□ -1.47
SOX1O00570 AL163973.1-201ENST00000484753 577 ntBASIC5.89□□□□□ -1.47
SOX1O00570 AL163540.1-201ENST00000485382 386 ntBASIC5.89□□□□□ -1.47
SOX1O00570 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.89□□□□□ -1.47
SOX1O00570 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.89□□□□□ -1.47
SOX1O00570 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.89□□□□□ -1.47
SOX1O00570 IGLV3-24-201ENST00000517477 197 ntBASIC5.89□□□□□ -1.47
SOX1O00570 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.89□□□□□ -1.47
SOX1O00570 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
SOX1O00570 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.89□□□□□ -1.47
SOX1O00570 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.89□□□□□ -1.47
SOX1O00570 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.89□□□□□ -1.47
SOX1O00570 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SOX1O00570 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
SOX1O00570 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SOX1O00570 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.89□□□□□ -1.47
SOX1O00570 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.89□□□□□ -1.47
SOX1O00570 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SOX1O00570 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SOX1O00570 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SOX1O00570 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SOX1O00570 THAP12P4-201ENST00000528321 2266 ntBASIC5.88□□□□□ -1.47
SOX1O00570 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SOX1O00570 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
SOX1O00570 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.88□□□□□ -1.47
SOX1O00570 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SOX1O00570 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC5.88□□□□□ -1.47
SOX1O00570 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SOX1O00570 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.88□□□□□ -1.47
SOX1O00570 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.88□□□□□ -1.47
SOX1O00570 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms