Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 RNU6-223P-201ENST00000362830 107 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 RN7SKP95-201ENST00000362860 303 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 Y_RNA.142-201ENST00000363491 102 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 RNU5A-8P-201ENST00000364102 114 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 Y_RNA.356-201ENST00000365475 113 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 OR4K12P-201ENST00000406538 961 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 MIR1193-201ENST00000408109 78 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 RNU2-9P-201ENST00000410194 145 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 CYP4F29P-201ENST00000420685 446 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 AC007562.1-201ENST00000421819 517 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 REREP1Y-201ENST00000422655 198 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 TIMM9P1-201ENST00000436122 256 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 AC096775.1-201ENST00000437724 448 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 REREP2Y-201ENST00000439103 200 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 AC023274.2-201ENST00000445264 521 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 AC010733.1-201ENST00000451515 401 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 AC104308.1-201ENST00000454621 333 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 AC097484.1-201ENST00000471148 389 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 MTCO2P30-201ENST00000503662 364 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 MTND6P2-201ENST00000512226 524 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 RNU6-835P-201ENST00000516974 104 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 ARL2BPP2-201ENST00000550907 489 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 AC018638.8-201ENST00000588755 281 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 AL035413.2-201ENST00000604801 525 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 AC004908.2-201ENST00000609090 574 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 AC135068.12-201ENST00000637370 931 ntBASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
TMEM88BA6NKF7 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
TMEM88BA6NKF7 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.39
TMEM88BA6NKF7 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TMEM88BA6NKF7 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TMEM88BA6NKF7 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.4□□□□□ -1.39
TMEM88BA6NKF7 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TMEM88BA6NKF7 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
TMEM88BA6NKF7 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.39
TMEM88BA6NKF7 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.39
TMEM88BA6NKF7 ZNF734P-201ENST00000419494 1534 ntBASIC6.4□□□□□ -1.39
TMEM88BA6NKF7 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.4□□□□□ -1.39
TMEM88BA6NKF7 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
TMEM88BA6NKF7 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TMEM88BA6NKF7 KALRN-204ENST00000360013 10806 ntAPPRIS P5 TSL 5 BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 XGY1-201ENST00000381172 446 ntBASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 RPS20P15-201ENST00000412792 311 ntBASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 AC009161.1-201ENST00000417306 376 ntBASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 SDCBPP3-201ENST00000419629 891 ntBASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 RPL12P46-201ENST00000436610 195 ntBASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 Z95327.1-201ENST00000446082 482 ntBASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 GAPDHP56-201ENST00000506031 988 ntBASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 AC016065.2-201ENST00000514530 444 ntBASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 COX6CP3-201ENST00000580869 223 ntBASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 AC011497.2-201ENST00000600255 639 ntBASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 AC091193.1-201ENST00000604640 448 ntBASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 AC115621.1-201ENST00000604653 858 ntBASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 AL162431.4-201ENST00000604674 411 ntBASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 AL391813.2-201ENST00000609113 322 ntBASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 AL355974.3-201ENST00000617383 467 ntBASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 MTND4P23-201ENST00000447723 1363 ntBASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TMEM88BA6NKF7 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms