Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 AP005242.2-201ENST00000580065 1175 ntBASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLDN16Q9Y5I7 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN16Q9Y5I7 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 AC097488.1-201ENST00000507834 756 ntBASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 CKBP1-201ENST00000565489 1086 ntBASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN16Q9Y5I7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 MIR1238-201ENST00000408483 83 ntBASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 AC087499.1-201ENST00000418141 1075 ntBASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 TSPY21P-201ENST00000433481 731 ntBASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 AC141586.3-201ENST00000562166 1838 ntBASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLDN16Q9Y5I7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CLDN16Q9Y5I7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms