Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 RPS2P52-201ENST00000469610 820 ntBASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHGB3Q9Y5G1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 AC093827.2-201ENST00000512654 315 ntBASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHGB3Q9Y5G1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 UBE2SP1-201ENST00000450587 669 ntBASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHGB3Q9Y5G1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 POM121L13P-201ENST00000422362 380 ntBASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 SOX15-203ENST00000570788 1093 ntBASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 AC120498.8-201ENST00000614275 531 ntBASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.23■□□□□ 0.51
PCDHGB3Q9Y5G1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms