Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PKP3Q9Y446 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PKP3Q9Y446 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PKP3Q9Y446 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.34■□□□□ 0.69
PKP3Q9Y446 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PKP3Q9Y446 NIFKP9-201ENST00000419265 221 ntBASIC19.34■□□□□ 0.69
PKP3Q9Y446 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PKP3Q9Y446 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PKP3Q9Y446 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PKP3Q9Y446 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
PKP3Q9Y446 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PKP3Q9Y446 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.34■□□□□ 0.69
PKP3Q9Y446 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.34■□□□□ 0.69
PKP3Q9Y446 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.34■□□□□ 0.69
PKP3Q9Y446 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PKP3Q9Y446 AL353708.3-201ENST00000610272 989 ntBASIC19.34■□□□□ 0.69
PKP3Q9Y446 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PKP3Q9Y446 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.34■□□□□ 0.69
PKP3Q9Y446 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PKP3Q9Y446 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.34■□□□□ 0.69
PKP3Q9Y446 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PKP3Q9Y446 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PKP3Q9Y446 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
PKP3Q9Y446 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PKP3Q9Y446 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.33■□□□□ 0.69
PKP3Q9Y446 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.33■□□□□ 0.69
PKP3Q9Y446 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PKP3Q9Y446 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.33■□□□□ 0.69
PKP3Q9Y446 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PKP3Q9Y446 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PKP3Q9Y446 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PKP3Q9Y446 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.33■□□□□ 0.68
PKP3Q9Y446 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PKP3Q9Y446 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.33■□□□□ 0.68
PKP3Q9Y446 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PKP3Q9Y446 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PKP3Q9Y446 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
PKP3Q9Y446 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.33■□□□□ 0.68
PKP3Q9Y446 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.33■□□□□ 0.68
PKP3Q9Y446 AL160286.2-201ENST00000567150 934 ntBASIC19.33■□□□□ 0.68
PKP3Q9Y446 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.33■□□□□ 0.68
PKP3Q9Y446 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.33■□□□□ 0.68
PKP3Q9Y446 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.33■□□□□ 0.68
PKP3Q9Y446 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PKP3Q9Y446 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PKP3Q9Y446 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.33■□□□□ 0.68
PKP3Q9Y446 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PKP3Q9Y446 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PKP3Q9Y446 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PKP3Q9Y446 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.68
PKP3Q9Y446 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.33■□□□□ 0.68
PKP3Q9Y446 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP3Q9Y446 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.32■□□□□ 0.68
PKP3Q9Y446 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP3Q9Y446 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP3Q9Y446 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP3Q9Y446 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.32■□□□□ 0.68
PKP3Q9Y446 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP3Q9Y446 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP3Q9Y446 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PKP3Q9Y446 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PKP3Q9Y446 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP3Q9Y446 KSR1P1-201ENST00000446298 240 ntBASIC19.32■□□□□ 0.68
PKP3Q9Y446 AF186192.3-201ENST00000583427 947 ntBASIC19.32■□□□□ 0.68
PKP3Q9Y446 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
PKP3Q9Y446 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.32■□□□□ 0.68
PKP3Q9Y446 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP3Q9Y446 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PKP3Q9Y446 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP3Q9Y446 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP3Q9Y446 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PKP3Q9Y446 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.32■□□□□ 0.68
PKP3Q9Y446 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PKP3Q9Y446 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
PKP3Q9Y446 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
PKP3Q9Y446 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PKP3Q9Y446 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PKP3Q9Y446 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.31■□□□□ 0.68
PKP3Q9Y446 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PKP3Q9Y446 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PKP3Q9Y446 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PKP3Q9Y446 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.31■□□□□ 0.68
PKP3Q9Y446 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PKP3Q9Y446 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PKP3Q9Y446 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PKP3Q9Y446 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PKP3Q9Y446 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.31■□□□□ 0.68
PKP3Q9Y446 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.31■□□□□ 0.68
PKP3Q9Y446 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.31■□□□□ 0.68
PKP3Q9Y446 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.31■□□□□ 0.68
PKP3Q9Y446 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.31■□□□□ 0.68
PKP3Q9Y446 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.31■□□□□ 0.68
PKP3Q9Y446 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.31■□□□□ 0.68
PKP3Q9Y446 AL445675.2-201ENST00000620291 557 ntBASIC19.31■□□□□ 0.68
PKP3Q9Y446 LINC01465-201ENST00000408887 1940 ntBASIC19.31■□□□□ 0.68
PKP3Q9Y446 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PKP3Q9Y446 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.31■□□□□ 0.68
PKP3Q9Y446 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PKP3Q9Y446 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.31■□□□□ 0.68
PKP3Q9Y446 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms