Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 AC012313.1-201ENST00000593393 3059 ntBASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 HLA-G-202ENST00000376815 851 ntBASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 HLA-G-203ENST00000376818 1127 ntBASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 AC027612.3-201ENST00000413684 1047 ntBASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RCL1Q9Y2P8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 AC068880.1-201ENST00000507289 2297 ntBASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 AC020916.1-201ENST00000587762 1774 ntBASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 LINC02228-203ENST00000641970 1355 ntBASIC15.75■□□□□ 0.11
RCL1Q9Y2P8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 OR6D1P-202ENST00000641007 5290 ntBASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 PKD1P1-201ENST00000458669 6805 ntBASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.74■□□□□ 0.11
RCL1Q9Y2P8 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RCL1Q9Y2P8 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms