Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 RNF165-205ENST00000588679 2904 ntBASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 SMG8-203ENST00000578922 2178 ntBASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSX2IPQ9Y2D8 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 AK4P3-201ENST00000418260 669 ntBASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 AC008040.2-201ENST00000461049 708 ntBASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 AL512604.3-201ENST00000569583 964 ntBASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 AC006011.2-201ENST00000621313 1158 ntBASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.69■□□□□ 0.9
SSX2IPQ9Y2D8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 TSPY17P-201ENST00000450329 467 ntBASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 AC091390.4-202ENST00000476426 537 ntBASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 AL160286.2-201ENST00000567150 934 ntBASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSX2IPQ9Y2D8 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 AC007952.6-201ENST00000573168 2673 ntBASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 AC003957.1-201ENST00000625108 2673 ntBASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.67■□□□□ 0.9
SSX2IPQ9Y2D8 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.66■□□□□ 0.9
SSX2IPQ9Y2D8 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX2IPQ9Y2D8 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX2IPQ9Y2D8 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSX2IPQ9Y2D8 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms