Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NPIPA1Q9UND3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPA1Q9UND3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.77■□□□□ 0.44
NPIPA1Q9UND3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.77■□□□□ 0.44
NPIPA1Q9UND3 CYP2D8P-201ENST00000433633 1490 ntBASIC17.77■□□□□ 0.44
NPIPA1Q9UND3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPA1Q9UND3 PHGDH-210ENST00000641115 1638 ntBASIC17.77■□□□□ 0.44
NPIPA1Q9UND3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
NPIPA1Q9UND3 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC17.77■□□□□ 0.44
NPIPA1Q9UND3 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPA1Q9UND3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NPIPA1Q9UND3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
NPIPA1Q9UND3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPA1Q9UND3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.77■□□□□ 0.44
NPIPA1Q9UND3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPA1Q9UND3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NPIPA1Q9UND3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.77■□□□□ 0.44
NPIPA1Q9UND3 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NPIPA1Q9UND3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
NPIPA1Q9UND3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NPIPA1Q9UND3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.76■□□□□ 0.43
NPIPA1Q9UND3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA1Q9UND3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA1Q9UND3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.76■□□□□ 0.43
NPIPA1Q9UND3 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.76■□□□□ 0.43
NPIPA1Q9UND3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.76■□□□□ 0.43
NPIPA1Q9UND3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.76■□□□□ 0.43
NPIPA1Q9UND3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NPIPA1Q9UND3 AL445675.2-201ENST00000620291 557 ntBASIC17.76■□□□□ 0.43
NPIPA1Q9UND3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NPIPA1Q9UND3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.76■□□□□ 0.43
NPIPA1Q9UND3 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA1Q9UND3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
NPIPA1Q9UND3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA1Q9UND3 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA1Q9UND3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA1Q9UND3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.76■□□□□ 0.43
NPIPA1Q9UND3 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA1Q9UND3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NPIPA1Q9UND3 FSCN1P1-201ENST00000568912 1481 ntBASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 AC005521.1-201ENST00000393351 872 ntBASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 KRT18P16-201ENST00000510337 1294 ntBASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 AC092865.7-201ENST00000641832 219 ntBASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
NPIPA1Q9UND3 KRT18P22-201ENST00000402024 1347 ntBASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 AC010947.1-201ENST00000623454 693 ntBASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 AP001271.2-201ENST00000624018 1556 ntBASIC17.74■□□□□ 0.43
NPIPA1Q9UND3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms