Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
RIMBP3Q9UFD9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.51
RIMBP3Q9UFD9 IMP4-203ENST00000409935 958 ntTSL 5 BASIC30.76■■■□□ 2.51
RIMBP3Q9UFD9 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC30.76■■■□□ 2.51
RIMBP3Q9UFD9 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC30.75■■■□□ 2.51
RIMBP3Q9UFD9 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
RIMBP3Q9UFD9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC30.75■■■□□ 2.51
RIMBP3Q9UFD9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
RIMBP3Q9UFD9 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RIMBP3Q9UFD9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RIMBP3Q9UFD9 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
RIMBP3Q9UFD9 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RIMBP3Q9UFD9 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC30.75■■■□□ 2.51
RIMBP3Q9UFD9 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC30.75■■■□□ 2.51
RIMBP3Q9UFD9 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
RIMBP3Q9UFD9 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC30.75■■■□□ 2.51
RIMBP3Q9UFD9 FAM215A-202ENST00000632077 792 ntBASIC30.75■■■□□ 2.51
RIMBP3Q9UFD9 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
RIMBP3Q9UFD9 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
RIMBP3Q9UFD9 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
RIMBP3Q9UFD9 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC30.74■■■□□ 2.51
RIMBP3Q9UFD9 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
RIMBP3Q9UFD9 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC30.74■■■□□ 2.51
RIMBP3Q9UFD9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC30.74■■■□□ 2.51
RIMBP3Q9UFD9 AL355877.3-201ENST00000622820 899 ntBASIC30.74■■■□□ 2.51
RIMBP3Q9UFD9 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
RIMBP3Q9UFD9 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
RIMBP3Q9UFD9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
RIMBP3Q9UFD9 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
RIMBP3Q9UFD9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC30.74■■■□□ 2.51
RIMBP3Q9UFD9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
RIMBP3Q9UFD9 AC104109.2-201ENST00000602919 1418 ntBASIC30.73■■■□□ 2.51
RIMBP3Q9UFD9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC30.73■■■□□ 2.51
RIMBP3Q9UFD9 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RIMBP3Q9UFD9 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC30.73■■■□□ 2.51
RIMBP3Q9UFD9 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC30.73■■■□□ 2.51
RIMBP3Q9UFD9 AL591424.1-201ENST00000442569 1213 ntBASIC30.73■■■□□ 2.51
RIMBP3Q9UFD9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC30.73■■■□□ 2.51
RIMBP3Q9UFD9 AL592071.1-201ENST00000611956 408 ntBASIC30.73■■■□□ 2.51
RIMBP3Q9UFD9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
RIMBP3Q9UFD9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
RIMBP3Q9UFD9 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC30.73■■■□□ 2.51
RIMBP3Q9UFD9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC30.73■■■□□ 2.51
RIMBP3Q9UFD9 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
RIMBP3Q9UFD9 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC30.73■■■□□ 2.51
RIMBP3Q9UFD9 MIR3687-2-201ENST00000577708 61 ntBASIC30.73■■■□□ 2.51
RIMBP3Q9UFD9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
RIMBP3Q9UFD9 MIR3687-1-201ENST00000614492 61 ntBASIC30.73■■■□□ 2.51
RIMBP3Q9UFD9 AC116407.3-201ENST00000623905 1129 ntBASIC30.73■■■□□ 2.51
RIMBP3Q9UFD9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
RIMBP3Q9UFD9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
RIMBP3Q9UFD9 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC30.72■■■□□ 2.51
RIMBP3Q9UFD9 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
RIMBP3Q9UFD9 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
RIMBP3Q9UFD9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
RIMBP3Q9UFD9 HNRNPDP1-201ENST00000439535 754 ntBASIC30.72■■■□□ 2.51
RIMBP3Q9UFD9 AC091607.1-201ENST00000490318 1060 ntBASIC30.72■■■□□ 2.51
RIMBP3Q9UFD9 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC30.72■■■□□ 2.51
RIMBP3Q9UFD9 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC30.72■■■□□ 2.51
RIMBP3Q9UFD9 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC30.72■■■□□ 2.51
RIMBP3Q9UFD9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC30.72■■■□□ 2.51
RIMBP3Q9UFD9 KRT18P28-201ENST00000453838 1332 ntBASIC30.71■■■□□ 2.51
RIMBP3Q9UFD9 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
RIMBP3Q9UFD9 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC30.71■■■□□ 2.51
RIMBP3Q9UFD9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC30.71■■■□□ 2.51
RIMBP3Q9UFD9 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC30.71■■■□□ 2.51
RIMBP3Q9UFD9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC30.71■■■□□ 2.51
RIMBP3Q9UFD9 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC30.71■■■□□ 2.51
RIMBP3Q9UFD9 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC30.71■■■□□ 2.51
RIMBP3Q9UFD9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC30.71■■■□□ 2.51
RIMBP3Q9UFD9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
RIMBP3Q9UFD9 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC30.7■■■□□ 2.51
RIMBP3Q9UFD9 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC30.7■■■□□ 2.51
RIMBP3Q9UFD9 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
RIMBP3Q9UFD9 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
RIMBP3Q9UFD9 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC30.7■■■□□ 2.51
RIMBP3Q9UFD9 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC30.7■■■□□ 2.51
RIMBP3Q9UFD9 SPCS2P1-201ENST00000561636 679 ntBASIC30.7■■■□□ 2.51
RIMBP3Q9UFD9 AC040169.1-201ENST00000565382 521 ntBASIC30.7■■■□□ 2.51
RIMBP3Q9UFD9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC30.7■■■□□ 2.51
RIMBP3Q9UFD9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC30.7■■■□□ 2.51
RIMBP3Q9UFD9 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC30.7■■■□□ 2.5
RIMBP3Q9UFD9 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
RIMBP3Q9UFD9 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC30.7■■■□□ 2.5
RIMBP3Q9UFD9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC30.7■■■□□ 2.5
RIMBP3Q9UFD9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
RIMBP3Q9UFD9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.5
RIMBP3Q9UFD9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC30.7■■■□□ 2.5
RIMBP3Q9UFD9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC30.7■■■□□ 2.5
RIMBP3Q9UFD9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC30.7■■■□□ 2.5
RIMBP3Q9UFD9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
RIMBP3Q9UFD9 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
RIMBP3Q9UFD9 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.5
RIMBP3Q9UFD9 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
RIMBP3Q9UFD9 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
RIMBP3Q9UFD9 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC30.69■■■□□ 2.5
RIMBP3Q9UFD9 WDR53-203ENST00000429115 683 ntTSL 2 BASIC30.69■■■□□ 2.5
RIMBP3Q9UFD9 CD63-204ENST00000546939 779 ntTSL 3 BASIC30.69■■■□□ 2.5
RIMBP3Q9UFD9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
RIMBP3Q9UFD9 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms