Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.14■□□□□ 0.49
CTSFQ9UBX1 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTSFQ9UBX1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.14■□□□□ 0.49
CTSFQ9UBX1 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.14■□□□□ 0.49
CTSFQ9UBX1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
CTSFQ9UBX1 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.14■□□□□ 0.49
CTSFQ9UBX1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTSFQ9UBX1 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CTSFQ9UBX1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.14■□□□□ 0.49
CTSFQ9UBX1 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.14■□□□□ 0.49
CTSFQ9UBX1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CTSFQ9UBX1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CTSFQ9UBX1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
CTSFQ9UBX1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC18.14■□□□□ 0.49
CTSFQ9UBX1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.14■□□□□ 0.49
CTSFQ9UBX1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.49
CTSFQ9UBX1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.14■□□□□ 0.49
CTSFQ9UBX1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 AC007952.6-201ENST00000573168 2673 ntBASIC18.13■□□□□ 0.49
CTSFQ9UBX1 AC003957.1-201ENST00000625108 2673 ntBASIC18.13■□□□□ 0.49
CTSFQ9UBX1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 RN7SL850P-201ENST00000579959 291 ntBASIC18.13■□□□□ 0.49
CTSFQ9UBX1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CTSFQ9UBX1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 TSPY14P-201ENST00000303979 915 ntBASIC18.12■□□□□ 0.49
CTSFQ9UBX1 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 INGX-201ENST00000359239 846 ntBASIC18.12■□□□□ 0.49
CTSFQ9UBX1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 AC113347.1-201ENST00000413321 391 ntBASIC18.12■□□□□ 0.49
CTSFQ9UBX1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 EGLN1P1-201ENST00000531623 762 ntBASIC18.12■□□□□ 0.49
CTSFQ9UBX1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CTSFQ9UBX1 ZNF815P-204ENST00000434898 1737 ntBASIC18.12■□□□□ 0.49
CTSFQ9UBX1 AC104417.2-201ENST00000562989 1793 ntBASIC18.12■□□□□ 0.49
CTSFQ9UBX1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.11■□□□□ 0.49
CTSFQ9UBX1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 AC005521.1-201ENST00000393351 872 ntBASIC18.11■□□□□ 0.49
CTSFQ9UBX1 TMPOP1-202ENST00000424642 1267 ntBASIC18.11■□□□□ 0.49
CTSFQ9UBX1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 SLC25A3P1-201ENST00000443844 931 ntBASIC18.11■□□□□ 0.49
CTSFQ9UBX1 ECEL1P2-202ENST00000465689 757 ntBASIC18.11■□□□□ 0.49
CTSFQ9UBX1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CTSFQ9UBX1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms