Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PPARGC1AQ9UBK2 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PPARGC1AQ9UBK2 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PPARGC1AQ9UBK2 AC012618.2-201ENST00000428058 849 ntBASIC20.06■□□□□ 0.8
PPARGC1AQ9UBK2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.06■□□□□ 0.8
PPARGC1AQ9UBK2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PPARGC1AQ9UBK2 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PPARGC1AQ9UBK2 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PPARGC1AQ9UBK2 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PPARGC1AQ9UBK2 AF186192.3-201ENST00000583427 947 ntBASIC20.06■□□□□ 0.8
PPARGC1AQ9UBK2 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PPARGC1AQ9UBK2 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PPARGC1AQ9UBK2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PPARGC1AQ9UBK2 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PPARGC1AQ9UBK2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PPARGC1AQ9UBK2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.06■□□□□ 0.8
PPARGC1AQ9UBK2 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PPARGC1AQ9UBK2 BX323043.1-201ENST00000641006 1765 ntBASIC20.06■□□□□ 0.8
PPARGC1AQ9UBK2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 RPS2P55-201ENST00000397318 883 ntBASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 NIFKP9-201ENST00000419265 221 ntBASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 AC107956.1-201ENST00000494359 873 ntBASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 FDX2-207ENST00000494368 584 ntTSL 4 BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 AC008550.1-201ENST00000511500 884 ntBASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PPARGC1AQ9UBK2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 AC233702.5-201ENST00000584107 538 ntBASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 AC138932.1-201ENST00000534164 6830 ntBASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PPARGC1AQ9UBK2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 AIRN-201ENST00000601203 4374 ntBASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 MIR718-201ENST00000390190 70 ntBASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 Z99916.2-201ENST00000604037 246 ntBASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 AP001412.1-201ENST00000608405 714 ntBASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
PPARGC1AQ9UBK2 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PPARGC1AQ9UBK2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms