Protein–RNA interactions for Protein: Q9NUM4

TMEM106B, Transmembrane protein 106B, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106BQ9NUM4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM106BQ9NUM4 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.3■□□□□ 0.2
TMEM106BQ9NUM4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.3■□□□□ 0.2
TMEM106BQ9NUM4 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.3■□□□□ 0.2
TMEM106BQ9NUM4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.3■□□□□ 0.2
TMEM106BQ9NUM4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM106BQ9NUM4 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM106BQ9NUM4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM106BQ9NUM4 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TMEM106BQ9NUM4 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TMEM106BQ9NUM4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 MIR6786-201ENST00000616843 113 ntBASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TMEM106BQ9NUM4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 UNC93B2-201ENST00000285383 730 ntBASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 RBM17P1-201ENST00000453646 1190 ntBASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 TSPY15P-201ENST00000457163 923 ntBASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 B3GAT3P1-201ENST00000471720 806 ntBASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 BX088651.1-201ENST00000540551 451 ntBASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 AC073912.3-201ENST00000624414 853 ntBASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 AC087289.5-201ENST00000586076 3175 ntBASIC16.28■□□□□ 0.2
TMEM106BQ9NUM4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.27■□□□□ 0.2
TMEM106BQ9NUM4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TMEM106BQ9NUM4 LINC01465-201ENST00000408887 1940 ntBASIC16.27■□□□□ 0.2
TMEM106BQ9NUM4 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC16.27■□□□□ 0.2
TMEM106BQ9NUM4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM106BQ9NUM4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM106BQ9NUM4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM106BQ9NUM4 RCC2P6-201ENST00000526625 1557 ntBASIC16.27■□□□□ 0.2
TMEM106BQ9NUM4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM106BQ9NUM4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM106BQ9NUM4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM106BQ9NUM4 AC011506.1-201ENST00000474329 610 ntBASIC16.27■□□□□ 0.2
TMEM106BQ9NUM4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.27■□□□□ 0.2
TMEM106BQ9NUM4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM106BQ9NUM4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TMEM106BQ9NUM4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.27■□□□□ 0.2
TMEM106BQ9NUM4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.27■□□□□ 0.2
TMEM106BQ9NUM4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.27■□□□□ 0.2
TMEM106BQ9NUM4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM106BQ9NUM4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM106BQ9NUM4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM106BQ9NUM4 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
TMEM106BQ9NUM4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC16.27■□□□□ 0.19
TMEM106BQ9NUM4 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM106BQ9NUM4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM106BQ9NUM4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
TMEM106BQ9NUM4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TMEM106BQ9NUM4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM106BQ9NUM4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM106BQ9NUM4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM106BQ9NUM4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM106BQ9NUM4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms