Protein–RNA interactions for Protein: Q9NRR4

DROSHA, Ribonuclease 3, humanhuman

Known RBP eCLIP

Length 1,374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHAQ9NRR4 UBC-211ENST00000542416 517 ntTSL 414.28□□□□□ -0.121e-15■■■□□ 15.4
DROSHAQ9NRR4 UBC-213ENST00000546120 718 ntTSL 5 BASIC14.02□□□□□ -0.171e-15■■■□□ 15.4
DROSHAQ9NRR4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.936e-8■■■□□ 15.4
DROSHAQ9NRR4 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.616e-8■■■□□ 15.4
DROSHAQ9NRR4 EP400NL-203ENST00000392352 2172 ntTSL 235.43■■■■□ 3.263e-8■■■□□ 15.4
DROSHAQ9NRR4 ANKMY1-213ENST00000418505 568 ntTSL 435.22■■■■□ 3.233e-8■■■□□ 15.4
DROSHAQ9NRR4 EP400NL-205ENST00000443539 1756 ntTSL 234.3■■■■□ 3.083e-8■■■□□ 15.4
DROSHAQ9NRR4 EP400NL-202ENST00000389560 1726 ntTSL 1 (best)33.62■■■□□ 2.973e-8■■■□□ 15.4
DROSHAQ9NRR4 ANKMY1-214ENST00000418708 945 ntTSL 331.51■■■□□ 2.633e-8■■■□□ 15.4
DROSHAQ9NRR4 ANKMY1-219ENST00000464991 1221 ntTSL 1 (best)30.85■■■□□ 2.533e-8■■■□□ 15.4
DROSHAQ9NRR4 EP400NL-207ENST00000454179 781 ntTSL 230.44■■■□□ 2.463e-8■■■□□ 15.4
DROSHAQ9NRR4 MLXIPL-207ENST00000453275 690 ntTSL 530.28■■■□□ 2.443e-8■■■□□ 15.4
DROSHAQ9NRR4 EP400NL-210ENST00000537558 861 ntTSL 429.65■■■□□ 2.343e-8■■■□□ 15.4
DROSHAQ9NRR4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC28.34■■■□□ 2.133e-8■■■□□ 15.4
DROSHAQ9NRR4 EP400NL-209ENST00000488030 1366 ntTSL 227.08■■□□□ 1.933e-8■■■□□ 15.4
DROSHAQ9NRR4 MLXIPL-208ENST00000456640 706 ntTSL 526.49■■□□□ 1.833e-8■■■□□ 15.4
DROSHAQ9NRR4 EP400NL-212ENST00000539351 564 ntTSL 425.85■■□□□ 1.733e-8■■■□□ 15.4
DROSHAQ9NRR4 ANKMY1-212ENST00000411765 652 ntTSL 425.52■■□□□ 1.683e-8■■■□□ 15.4
DROSHAQ9NRR4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC24.09■■□□□ 1.453e-8■■■□□ 15.4
DROSHAQ9NRR4 ANKMY1-222ENST00000484526 2969 ntTSL 222.91■■□□□ 1.263e-8■■■□□ 15.4
DROSHAQ9NRR4 ANKMY1-218ENST00000462004 582 ntTSL 422.91■■□□□ 1.263e-8■■■□□ 15.4
DROSHAQ9NRR4 ANKMY1-224ENST00000496300 1569 ntTSL 522.4■■□□□ 1.183e-8■■■□□ 15.4
DROSHAQ9NRR4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC22.24■■□□□ 1.153e-8■■■□□ 15.4
DROSHAQ9NRR4 ANKMY1-216ENST00000443318 565 ntTSL 321.9■■□□□ 1.13e-8■■■□□ 15.4
DROSHAQ9NRR4 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC21.42■■□□□ 1.023e-8■■■□□ 15.4
DROSHAQ9NRR4 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC21.06■□□□□ 0.963e-8■■■□□ 15.4
DROSHAQ9NRR4 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC20.87■□□□□ 0.933e-8■■■□□ 15.4
DROSHAQ9NRR4 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.93e-8■■■□□ 15.4
DROSHAQ9NRR4 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC20.69■□□□□ 0.93e-8■■■□□ 15.4
DROSHAQ9NRR4 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC20.25■□□□□ 0.833e-8■■■□□ 15.4
DROSHAQ9NRR4 ANKMY1-215ENST00000441168 555 ntTSL 419.84■□□□□ 0.773e-8■■■□□ 15.4
DROSHAQ9NRR4 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.763e-8■■■□□ 15.4
DROSHAQ9NRR4 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC19.52■□□□□ 0.723e-8■■■□□ 15.4
DROSHAQ9NRR4 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC19.47■□□□□ 0.713e-8■■■□□ 15.4
DROSHAQ9NRR4 MLXIPL-202ENST00000345114 3079 ntTSL 1 (best)18.85■□□□□ 0.613e-8■■■□□ 15.4
DROSHAQ9NRR4 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.63e-8■■■□□ 15.4
DROSHAQ9NRR4 AC025682.1-203ENST00000584391 442 ntTSL 2 BASIC18.75■□□□□ 0.598e-7■■■□□ 15.4
DROSHAQ9NRR4 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC18.22■□□□□ 0.513e-8■■■□□ 15.4
DROSHAQ9NRR4 ANKMY1-201ENST00000272972 3228 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.473e-8■■■□□ 15.4
DROSHAQ9NRR4 AC025682.1-204ENST00000580045 733 ntTSL 5 BASIC16.12■□□□□ 0.178e-7■■■□□ 15.4
DROSHAQ9NRR4 MLXIPL-211ENST00000488212 534 ntTSL 216.12■□□□□ 0.173e-8■■■□□ 15.4
DROSHAQ9NRR4 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.96□□□□□ -1.788e-7■■■□□ 15.4
DROSHAQ9NRR4 DNM2-215ENST00000590806 5651 ntTSL 216.79■□□□□ 0.284e-7■■■□□ 15.4
DROSHAQ9NRR4 DNM2-214ENST00000590787 4299 ntTSL 215.02■□□□□ -04e-7■■■□□ 15.4
DROSHAQ9NRR4 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.583e-7■■■□□ 15.4
DROSHAQ9NRR4 EHBP1-204ENST00000405482 1311 ntTSL 234.43■■■■□ 3.11e-12■■■□□ 15.4
DROSHAQ9NRR4 SF3A2-203ENST00000587637 501 ntTSL 226.71■■□□□ 1.878e-9■■■□□ 15.4
DROSHAQ9NRR4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.521e-12■■■□□ 15.4
DROSHAQ9NRR4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.331e-8■■■□□ 15.4
DROSHAQ9NRR4 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.531e-8■■■□□ 15.4
DROSHAQ9NRR4 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC16.21■□□□□ 0.191e-9■■■□□ 15.4
DROSHAQ9NRR4 SRRM2-216ENST00000573583 543 ntTSL 415.06■□□□□ 03e-25■■■□□ 15.4
DROSHAQ9NRR4 EHBP1-205ENST00000413434 533 ntTSL 414.89□□□□□ -0.031e-12■■■□□ 15.4
DROSHAQ9NRR4 EHBP1-217ENST00000472809 1374 ntTSL 514.35□□□□□ -0.111e-12■■■□□ 15.4
DROSHAQ9NRR4 EHBP1-211ENST00000449820 539 ntTSL 513.78□□□□□ -0.21e-12■■■□□ 15.4
DROSHAQ9NRR4 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC12.85□□□□□ -0.351e-9■■■□□ 15.4
DROSHAQ9NRR4 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.381e-9■■■□□ 15.4
DROSHAQ9NRR4 EHBP1-207ENST00000426940 586 ntTSL 412.66□□□□□ -0.381e-12■■■□□ 15.4
DROSHAQ9NRR4 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.441e-12■■■□□ 15.4
DROSHAQ9NRR4 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.721e-9■■■□□ 15.4
DROSHAQ9NRR4 PUM1-211ENST00000498419 3068 ntTSL 59.79□□□□□ -0.841e-9■■■□□ 15.4
DROSHAQ9NRR4 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC9.65□□□□□ -0.871e-9■■■□□ 15.4
DROSHAQ9NRR4 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.911e-9■■■□□ 15.4
DROSHAQ9NRR4 PUM1-214ENST00000525843 4528 ntTSL 59.31□□□□□ -0.921e-9■■■□□ 15.4
DROSHAQ9NRR4 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC8.94□□□□□ -0.981e-9■■■□□ 15.4
DROSHAQ9NRR4 EHBP1-219ENST00000494958 1127 ntTSL 1 (best)8.76□□□□□ -1.011e-12■■■□□ 15.4
DROSHAQ9NRR4 EHBP1-208ENST00000427809 581 ntTSL 48.18□□□□□ -1.11e-12■■■□□ 15.4
DROSHAQ9NRR4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC7.74□□□□□ -1.171e-12■■■□□ 15.4
DROSHAQ9NRR4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.342e-14■■■□□ 15.4
DROSHAQ9NRR4 SEMA4C-202ENST00000442264 817 ntTSL 331.35■■■□□ 2.612e-10■■■□□ 15.4
DROSHAQ9NRR4 NDUFC1-204ENST00000503453 682 ntTSL 326.99■■□□□ 1.919e-11■■■□□ 15.4
DROSHAQ9NRR4 NDUFC1-207ENST00000507764 838 ntTSL 223.62■■□□□ 1.379e-11■■■□□ 15.4
DROSHAQ9NRR4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.379e-11■■■□□ 15.4
DROSHAQ9NRR4 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.319e-11■■■□□ 15.4
DROSHAQ9NRR4 NDUFC1-202ENST00000394225 664 ntTSL 223.27■■□□□ 1.319e-11■■■□□ 15.4
DROSHAQ9NRR4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.239e-11■■■□□ 15.4
DROSHAQ9NRR4 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.099e-11■■■□□ 15.4
DROSHAQ9NRR4 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC21.87■■□□□ 1.099e-11■■■□□ 15.4
DROSHAQ9NRR4 NDUFC1-208ENST00000513022 564 ntTSL 419.96■□□□□ 0.799e-11■■■□□ 15.4
DROSHAQ9NRR4 NDUFC1-206ENST00000505036 809 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.619e-11■■■□□ 15.4
DROSHAQ9NRR4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.341e-8■■■□□ 15.4
DROSHAQ9NRR4 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.181e-8■■■□□ 15.4
DROSHAQ9NRR4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.171e-8■■■□□ 15.4
DROSHAQ9NRR4 NDUFC1-205ENST00000503997 628 ntTSL 315.95■□□□□ 0.149e-11■■■□□ 15.4
DROSHAQ9NRR4 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.861e-8■■■□□ 15.4
DROSHAQ9NRR4 LRP5-206ENST00000529993 5103 ntTSL 1 (best)18.67■□□□□ 0.581e-8■■■□□ 15.4
DROSHAQ9NRR4 NDUFS7-207ENST00000538523 931 ntTSL 226.79■■□□□ 1.883e-7■■■□□ 15.4
DROSHAQ9NRR4 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC25.54■■□□□ 1.683e-7■■■□□ 15.4
DROSHAQ9NRR4 NDUFS7-208ENST00000538662 1186 ntTSL 223.37■■□□□ 1.333e-7■■■□□ 15.4
DROSHAQ9NRR4 NDUFS7-209ENST00000538929 630 ntTSL 422.56■■□□□ 1.23e-7■■■□□ 15.4
DROSHAQ9NRR4 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC21.36■■□□□ 1.013e-7■■■□□ 15.4
DROSHAQ9NRR4 NDUFS7-204ENST00000436115 2879 ntTSL 521■□□□□ 0.953e-7■■■□□ 15.4
DROSHAQ9NRR4 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC32.37■■■□□ 2.771e-6■■■□□ 15.4
DROSHAQ9NRR4 TARDBP-225ENST00000621715 816 ntTSL 326.8■■□□□ 1.881e-6■■■□□ 15.4
DROSHAQ9NRR4 TARDBP-203ENST00000439080 1388 ntTSL 225.95■■□□□ 1.741e-6■■■□□ 15.4
DROSHAQ9NRR4 TARDBP-215ENST00000613864 584 ntTSL 423.01■■□□□ 1.271e-6■■■□□ 15.4
DROSHAQ9NRR4 TARDBP-204ENST00000472476 1001 ntTSL 523.01■■□□□ 1.271e-6■■■□□ 15.4
DROSHAQ9NRR4 TARDBP-207ENST00000476201 929 ntTSL 523.01■■□□□ 1.271e-6■■■□□ 15.4
DROSHAQ9NRR4 TARDBP-231ENST00000639599 1283 ntTSL 522.93■■□□□ 1.261e-6■■■□□ 15.4
DROSHAQ9NRR4 TARDBP-230ENST00000639083 2269 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.151e-6■■■□□ 15.4
Retrieved 100 of 16,331 protein–RNA pairs in 121.8 ms