Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 UNC93B4-201ENST00000505679 747 ntBASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 AC008687.6-201ENST00000596318 630 ntBASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CTPS2Q9NRF8 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 LINC01465-201ENST00000408887 1940 ntBASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.9■□□□□ 0.46
CTPS2Q9NRF8 AL049812.1-201ENST00000432563 2267 ntBASIC17.89■□□□□ 0.46
CTPS2Q9NRF8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
CTPS2Q9NRF8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CTPS2Q9NRF8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
CTPS2Q9NRF8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CTPS2Q9NRF8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
CTPS2Q9NRF8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.89■□□□□ 0.45
CTPS2Q9NRF8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTPS2Q9NRF8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CTPS2Q9NRF8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CTPS2Q9NRF8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTPS2Q9NRF8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
CTPS2Q9NRF8 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CTPS2Q9NRF8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.88■□□□□ 0.45
CTPS2Q9NRF8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CTPS2Q9NRF8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CTPS2Q9NRF8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms