Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM7Q9NR12 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.62■■□□□ 1.05
PDLIM7Q9NR12 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.62■■□□□ 1.05
PDLIM7Q9NR12 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.62■■□□□ 1.05
PDLIM7Q9NR12 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.62■■□□□ 1.05
PDLIM7Q9NR12 AC069148.1-201ENST00000608741 768 ntBASIC21.62■■□□□ 1.05
PDLIM7Q9NR12 AL023803.3-201ENST00000615559 522 ntBASIC21.62■■□□□ 1.05
PDLIM7Q9NR12 AL031432.5-201ENST00000641059 760 ntBASIC21.62■■□□□ 1.05
PDLIM7Q9NR12 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC21.62■■□□□ 1.05
PDLIM7Q9NR12 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM7Q9NR12 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PDLIM7Q9NR12 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 AL441883.1-201ENST00000566170 1045 ntBASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PDLIM7Q9NR12 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDLIM7Q9NR12 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PDLIM7Q9NR12 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.6■■□□□ 1.05
PDLIM7Q9NR12 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDLIM7Q9NR12 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.6■■□□□ 1.05
PDLIM7Q9NR12 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.6■■□□□ 1.05
PDLIM7Q9NR12 AL691432.3-201ENST00000621860 400 ntBASIC21.6■■□□□ 1.05
PDLIM7Q9NR12 AL023973.1-201ENST00000624619 620 ntBASIC21.6■■□□□ 1.05
PDLIM7Q9NR12 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDLIM7Q9NR12 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PDLIM7Q9NR12 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.6■■□□□ 1.05
PDLIM7Q9NR12 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC21.6■■□□□ 1.05
PDLIM7Q9NR12 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.6■■□□□ 1.05
PDLIM7Q9NR12 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
PDLIM7Q9NR12 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.6■■□□□ 1.05
PDLIM7Q9NR12 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.6■■□□□ 1.05
PDLIM7Q9NR12 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PDLIM7Q9NR12 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDLIM7Q9NR12 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.58■■□□□ 1.05
PDLIM7Q9NR12 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDLIM7Q9NR12 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDLIM7Q9NR12 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
PDLIM7Q9NR12 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDLIM7Q9NR12 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDLIM7Q9NR12 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PDLIM7Q9NR12 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PDLIM7Q9NR12 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PDLIM7Q9NR12 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.58■■□□□ 1.05
PDLIM7Q9NR12 KRT18P38-201ENST00000449496 1282 ntBASIC21.58■■□□□ 1.05
PDLIM7Q9NR12 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.58■■□□□ 1.05
PDLIM7Q9NR12 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.58■■□□□ 1.05
PDLIM7Q9NR12 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.58■■□□□ 1.05
PDLIM7Q9NR12 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
PDLIM7Q9NR12 AC008622.2-201ENST00000617006 1229 ntBASIC21.58■■□□□ 1.05
PDLIM7Q9NR12 AC012313.10-201ENST00000623509 926 ntBASIC21.58■■□□□ 1.05
PDLIM7Q9NR12 AC125437.2-201ENST00000625180 2167 ntBASIC21.58■■□□□ 1.04
PDLIM7Q9NR12 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDLIM7Q9NR12 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PDLIM7Q9NR12 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.57■■□□□ 1.04
PDLIM7Q9NR12 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms