Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC22.77■■□□□ 1.24
DDX4Q9NQI0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 TSPY23P-201ENST00000440136 739 ntBASIC22.77■■□□□ 1.24
DDX4Q9NQI0 AC092647.4-201ENST00000457211 535 ntBASIC22.77■■□□□ 1.24
DDX4Q9NQI0 AL359075.1-203ENST00000462729 1002 ntBASIC22.77■■□□□ 1.24
DDX4Q9NQI0 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC22.77■■□□□ 1.24
DDX4Q9NQI0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
DDX4Q9NQI0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
DDX4Q9NQI0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
DDX4Q9NQI0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC22.76■■□□□ 1.23
DDX4Q9NQI0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC22.76■■□□□ 1.23
DDX4Q9NQI0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
DDX4Q9NQI0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.76■■□□□ 1.23
DDX4Q9NQI0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
DDX4Q9NQI0 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC22.76■■□□□ 1.23
DDX4Q9NQI0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC22.76■■□□□ 1.23
DDX4Q9NQI0 AL512604.3-201ENST00000569583 964 ntBASIC22.76■■□□□ 1.23
DDX4Q9NQI0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
DDX4Q9NQI0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.76■■□□□ 1.23
DDX4Q9NQI0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
DDX4Q9NQI0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
DDX4Q9NQI0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
DDX4Q9NQI0 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC22.76■■□□□ 1.23
DDX4Q9NQI0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC22.76■■□□□ 1.23
DDX4Q9NQI0 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
DDX4Q9NQI0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
DDX4Q9NQI0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.73■■□□□ 1.23
DDX4Q9NQI0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
DDX4Q9NQI0 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
DDX4Q9NQI0 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
DDX4Q9NQI0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC22.73■■□□□ 1.23
DDX4Q9NQI0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
DDX4Q9NQI0 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
DDX4Q9NQI0 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC22.73■■□□□ 1.23
DDX4Q9NQI0 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
DDX4Q9NQI0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC22.73■■□□□ 1.23
DDX4Q9NQI0 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
DDX4Q9NQI0 UPK3BP1-201ENST00000428678 509 ntBASIC22.73■■□□□ 1.23
DDX4Q9NQI0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC22.73■■□□□ 1.23
DDX4Q9NQI0 AC009947.2-201ENST00000444014 672 ntBASIC22.73■■□□□ 1.23
DDX4Q9NQI0 FAM86EP-206ENST00000510506 987 ntBASIC22.73■■□□□ 1.23
DDX4Q9NQI0 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC22.73■■□□□ 1.23
DDX4Q9NQI0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC22.73■■□□□ 1.23
DDX4Q9NQI0 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.73■■□□□ 1.23
DDX4Q9NQI0 AC008622.2-201ENST00000617006 1229 ntBASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms