Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 CCR12P-201ENST00000446203 998 ntBASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 AC091390.4-202ENST00000476426 537 ntBASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TM9SF3Q9HD45 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TM9SF3Q9HD45 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TM9SF3Q9HD45 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
TM9SF3Q9HD45 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
TM9SF3Q9HD45 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TM9SF3Q9HD45 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.27■□□□□ 0.67
TM9SF3Q9HD45 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TM9SF3Q9HD45 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TM9SF3Q9HD45 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 Z85996.1-201ENST00000494644 937 ntBASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 AC022616.7-201ENST00000525383 220 ntBASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 BX119927.1-201ENST00000636596 1552 ntBASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TM9SF3Q9HD45 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 KRT8P8-201ENST00000434750 1448 ntBASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 AC117947.1-201ENST00000427448 529 ntBASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 SLC25A1P2-201ENST00000430693 912 ntBASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 AC063952.2-201ENST00000498792 1227 ntBASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
TM9SF3Q9HD45 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 LINC01238-205ENST00000567549 1107 ntBASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.24■□□□□ 0.67
TM9SF3Q9HD45 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms