Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.85■□□□□ 0.77
USP29Q9HBJ7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP29Q9HBJ7 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.85■□□□□ 0.77
USP29Q9HBJ7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.85■□□□□ 0.77
USP29Q9HBJ7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP29Q9HBJ7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
USP29Q9HBJ7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.85■□□□□ 0.77
USP29Q9HBJ7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP29Q9HBJ7 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP29Q9HBJ7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP29Q9HBJ7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP29Q9HBJ7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
USP29Q9HBJ7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
USP29Q9HBJ7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 AC133681.1-201ENST00000465482 601 ntBASIC19.84■□□□□ 0.77
USP29Q9HBJ7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 Z99916.2-201ENST00000604037 246 ntBASIC19.84■□□□□ 0.77
USP29Q9HBJ7 AC073912.3-201ENST00000624414 853 ntBASIC19.84■□□□□ 0.77
USP29Q9HBJ7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.84■□□□□ 0.77
USP29Q9HBJ7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.83■□□□□ 0.77
USP29Q9HBJ7 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.83■□□□□ 0.77
USP29Q9HBJ7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP29Q9HBJ7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP29Q9HBJ7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
USP29Q9HBJ7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP29Q9HBJ7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.83■□□□□ 0.77
USP29Q9HBJ7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP29Q9HBJ7 TUBB8P6-201ENST00000436895 1288 ntBASIC19.83■□□□□ 0.77
USP29Q9HBJ7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP29Q9HBJ7 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
USP29Q9HBJ7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.83■□□□□ 0.77
USP29Q9HBJ7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.83■□□□□ 0.77
USP29Q9HBJ7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.83■□□□□ 0.77
USP29Q9HBJ7 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
USP29Q9HBJ7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
USP29Q9HBJ7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.83■□□□□ 0.77
USP29Q9HBJ7 AP001412.1-201ENST00000608405 714 ntBASIC19.83■□□□□ 0.77
USP29Q9HBJ7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.83■□□□□ 0.77
USP29Q9HBJ7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP29Q9HBJ7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
USP29Q9HBJ7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP29Q9HBJ7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP29Q9HBJ7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP29Q9HBJ7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP29Q9HBJ7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
USP29Q9HBJ7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
USP29Q9HBJ7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.76
USP29Q9HBJ7 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
USP29Q9HBJ7 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
USP29Q9HBJ7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
USP29Q9HBJ7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP29Q9HBJ7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.83■□□□□ 0.76
USP29Q9HBJ7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP29Q9HBJ7 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
USP29Q9HBJ7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP29Q9HBJ7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
USP29Q9HBJ7 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.82■□□□□ 0.76
USP29Q9HBJ7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.82■□□□□ 0.76
USP29Q9HBJ7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP29Q9HBJ7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP29Q9HBJ7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP29Q9HBJ7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP29Q9HBJ7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP29Q9HBJ7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP29Q9HBJ7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.82■□□□□ 0.76
USP29Q9HBJ7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP29Q9HBJ7 MTDHP1-201ENST00000605323 784 ntBASIC19.82■□□□□ 0.76
USP29Q9HBJ7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP29Q9HBJ7 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.82■□□□□ 0.76
USP29Q9HBJ7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.82■□□□□ 0.76
USP29Q9HBJ7 AL135905.2-201ENST00000584934 1404 ntBASIC19.82■□□□□ 0.76
USP29Q9HBJ7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
USP29Q9HBJ7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.82■□□□□ 0.76
USP29Q9HBJ7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP29Q9HBJ7 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.82■□□□□ 0.76
USP29Q9HBJ7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms