Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.8■□□□□ 0.28
ELL3Q9HB65 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.8■□□□□ 0.28
ELL3Q9HB65 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC16.8■□□□□ 0.28
ELL3Q9HB65 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ELL3Q9HB65 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ELL3Q9HB65 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ELL3Q9HB65 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ELL3Q9HB65 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ELL3Q9HB65 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.8■□□□□ 0.28
ELL3Q9HB65 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ELL3Q9HB65 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.8■□□□□ 0.28
ELL3Q9HB65 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.8■□□□□ 0.28
ELL3Q9HB65 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.8■□□□□ 0.28
ELL3Q9HB65 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.79■□□□□ 0.28
ELL3Q9HB65 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
ELL3Q9HB65 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ELL3Q9HB65 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.79■□□□□ 0.28
ELL3Q9HB65 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ELL3Q9HB65 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ELL3Q9HB65 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ELL3Q9HB65 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ELL3Q9HB65 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ELL3Q9HB65 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ELL3Q9HB65 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.79■□□□□ 0.28
ELL3Q9HB65 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ELL3Q9HB65 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.79■□□□□ 0.28
ELL3Q9HB65 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.79■□□□□ 0.28
ELL3Q9HB65 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.79■□□□□ 0.28
ELL3Q9HB65 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.79■□□□□ 0.28
ELL3Q9HB65 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ELL3Q9HB65 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ELL3Q9HB65 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
ELL3Q9HB65 AC092118.2-201ENST00000613495 667 ntBASIC16.79■□□□□ 0.28
ELL3Q9HB65 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ELL3Q9HB65 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ELL3Q9HB65 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ELL3Q9HB65 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ELL3Q9HB65 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ELL3Q9HB65 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.79■□□□□ 0.28
ELL3Q9HB65 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ELL3Q9HB65 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ELL3Q9HB65 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
ELL3Q9HB65 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ELL3Q9HB65 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.78■□□□□ 0.28
ELL3Q9HB65 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ELL3Q9HB65 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.78■□□□□ 0.28
ELL3Q9HB65 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.78■□□□□ 0.28
ELL3Q9HB65 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ELL3Q9HB65 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ELL3Q9HB65 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ELL3Q9HB65 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
ELL3Q9HB65 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ELL3Q9HB65 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.78■□□□□ 0.28
ELL3Q9HB65 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.78■□□□□ 0.28
ELL3Q9HB65 MIR4758-201ENST00000577688 71 ntBASIC16.78■□□□□ 0.28
ELL3Q9HB65 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ELL3Q9HB65 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.78■□□□□ 0.28
ELL3Q9HB65 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC16.78■□□□□ 0.28
ELL3Q9HB65 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ELL3Q9HB65 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.78■□□□□ 0.28
ELL3Q9HB65 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.78■□□□□ 0.28
ELL3Q9HB65 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ELL3Q9HB65 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ELL3Q9HB65 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ELL3Q9HB65 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
ELL3Q9HB65 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ELL3Q9HB65 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
ELL3Q9HB65 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ELL3Q9HB65 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ELL3Q9HB65 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
ELL3Q9HB65 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ELL3Q9HB65 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ELL3Q9HB65 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.77■□□□□ 0.28
ELL3Q9HB65 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ELL3Q9HB65 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
ELL3Q9HB65 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
ELL3Q9HB65 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ELL3Q9HB65 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.77■□□□□ 0.28
ELL3Q9HB65 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
ELL3Q9HB65 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ELL3Q9HB65 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
ELL3Q9HB65 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
ELL3Q9HB65 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.77■□□□□ 0.28
ELL3Q9HB65 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.77■□□□□ 0.28
ELL3Q9HB65 AC091874.3-201ENST00000512672 1195 ntBASIC16.77■□□□□ 0.28
ELL3Q9HB65 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.77■□□□□ 0.28
ELL3Q9HB65 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.77■□□□□ 0.28
ELL3Q9HB65 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
ELL3Q9HB65 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.77■□□□□ 0.28
ELL3Q9HB65 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.77■□□□□ 0.28
ELL3Q9HB65 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ELL3Q9HB65 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ELL3Q9HB65 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ELL3Q9HB65 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ELL3Q9HB65 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ELL3Q9HB65 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ELL3Q9HB65 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ELL3Q9HB65 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ELL3Q9HB65 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
ELL3Q9HB65 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms