Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCNX3Q9H6A9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.46■□□□□ 0.39
PCNX3Q9H6A9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.46■□□□□ 0.39
PCNX3Q9H6A9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.46■□□□□ 0.39
PCNX3Q9H6A9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.46■□□□□ 0.39
PCNX3Q9H6A9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.46■□□□□ 0.39
PCNX3Q9H6A9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCNX3Q9H6A9 AC097488.1-201ENST00000507834 756 ntBASIC17.46■□□□□ 0.39
PCNX3Q9H6A9 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.46■□□□□ 0.39
PCNX3Q9H6A9 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.46■□□□□ 0.39
PCNX3Q9H6A9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCNX3Q9H6A9 AP001412.1-201ENST00000608405 714 ntBASIC17.46■□□□□ 0.39
PCNX3Q9H6A9 AC131212.4-201ENST00000623606 975 ntBASIC17.46■□□□□ 0.39
PCNX3Q9H6A9 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCNX3Q9H6A9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCNX3Q9H6A9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCNX3Q9H6A9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.46■□□□□ 0.39
PCNX3Q9H6A9 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCNX3Q9H6A9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.46■□□□□ 0.39
PCNX3Q9H6A9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCNX3Q9H6A9 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 TSPY23P-201ENST00000440136 739 ntBASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCNX3Q9H6A9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 AC004980.1-204ENST00000429707 299 ntBASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 MIR4785-201ENST00000585005 73 ntBASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
PCNX3Q9H6A9 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 UNC93B2-201ENST00000285383 730 ntBASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 FSCN1P1-201ENST00000568912 1481 ntBASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 AC087289.5-201ENST00000586076 3175 ntBASIC17.43■□□□□ 0.38
PCNX3Q9H6A9 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCNX3Q9H6A9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms