Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN3LQ9H3M9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 CCR12P-201ENST00000446203 998 ntBASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
ATXN3LQ9H3M9 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3LQ9H3M9 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ATXN3LQ9H3M9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3LQ9H3M9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ATXN3LQ9H3M9 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ATXN3LQ9H3M9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3LQ9H3M9 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
ATXN3LQ9H3M9 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3LQ9H3M9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.22■□□□□ 0.83
ATXN3LQ9H3M9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ATXN3LQ9H3M9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.22■□□□□ 0.83
ATXN3LQ9H3M9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3LQ9H3M9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.22■□□□□ 0.83
ATXN3LQ9H3M9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3LQ9H3M9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3LQ9H3M9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3LQ9H3M9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN3LQ9H3M9 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.22■□□□□ 0.83
ATXN3LQ9H3M9 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 AC009237.14-201ENST00000609975 1594 ntBASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 HMGA1P5-201ENST00000412453 271 ntBASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 SLC25A1P2-201ENST00000430693 912 ntBASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 NTF6B-201ENST00000591913 560 ntBASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 AC006011.2-201ENST00000621313 1158 ntBASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN3LQ9H3M9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
ATXN3LQ9H3M9 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3LQ9H3M9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3LQ9H3M9 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3LQ9H3M9 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3LQ9H3M9 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ATXN3LQ9H3M9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.2■□□□□ 0.82
ATXN3LQ9H3M9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3LQ9H3M9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.2■□□□□ 0.82
ATXN3LQ9H3M9 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3LQ9H3M9 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.2■□□□□ 0.82
ATXN3LQ9H3M9 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.2■□□□□ 0.82
ATXN3LQ9H3M9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.2■□□□□ 0.82
ATXN3LQ9H3M9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3LQ9H3M9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3LQ9H3M9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN3LQ9H3M9 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms