Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
VCX3BQ9H321 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.35■□□□□ 0.53
VCX3BQ9H321 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.35■□□□□ 0.53
VCX3BQ9H321 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
VCX3BQ9H321 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC18.35■□□□□ 0.53
VCX3BQ9H321 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC18.35■□□□□ 0.53
VCX3BQ9H321 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
VCX3BQ9H321 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VCX3BQ9H321 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
VCX3BQ9H321 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.35■□□□□ 0.53
VCX3BQ9H321 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCX3BQ9H321 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCX3BQ9H321 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCX3BQ9H321 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VCX3BQ9H321 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCX3BQ9H321 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCX3BQ9H321 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VCX3BQ9H321 AC120498.10-201ENST00000621827 505 ntBASIC18.34■□□□□ 0.53
VCX3BQ9H321 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
VCX3BQ9H321 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCX3BQ9H321 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCX3BQ9H321 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VCX3BQ9H321 AC124067.4-201ENST00000519691 2379 ntBASIC18.34■□□□□ 0.53
VCX3BQ9H321 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCX3BQ9H321 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
VCX3BQ9H321 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCX3BQ9H321 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.34■□□□□ 0.53
VCX3BQ9H321 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCX3BQ9H321 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCX3BQ9H321 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCX3BQ9H321 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
VCX3BQ9H321 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VCX3BQ9H321 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VCX3BQ9H321 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.33■□□□□ 0.53
VCX3BQ9H321 FP475955.4-201ENST00000623131 1990 ntBASIC18.33■□□□□ 0.53
VCX3BQ9H321 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.33■□□□□ 0.53
VCX3BQ9H321 OR6D1P-203ENST00000641209 4860 ntBASIC18.33■□□□□ 0.53
VCX3BQ9H321 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VCX3BQ9H321 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
VCX3BQ9H321 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
VCX3BQ9H321 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
VCX3BQ9H321 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.33■□□□□ 0.53
VCX3BQ9H321 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
VCX3BQ9H321 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
VCX3BQ9H321 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCX3BQ9H321 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCX3BQ9H321 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.52
VCX3BQ9H321 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCX3BQ9H321 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.33■□□□□ 0.52
VCX3BQ9H321 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
VCX3BQ9H321 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.33■□□□□ 0.52
VCX3BQ9H321 AC133561.4-201ENST00000566112 224 ntBASIC18.33■□□□□ 0.52
VCX3BQ9H321 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.33■□□□□ 0.52
VCX3BQ9H321 AC011298.3-201ENST00000615796 283 ntBASIC18.33■□□□□ 0.52
VCX3BQ9H321 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCX3BQ9H321 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCX3BQ9H321 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCX3BQ9H321 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VCX3BQ9H321 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
VCX3BQ9H321 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
VCX3BQ9H321 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3BQ9H321 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3BQ9H321 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.32■□□□□ 0.52
VCX3BQ9H321 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
VCX3BQ9H321 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
VCX3BQ9H321 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3BQ9H321 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3BQ9H321 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3BQ9H321 AL512353.2-201ENST00000448759 1962 ntBASIC18.32■□□□□ 0.52
VCX3BQ9H321 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3BQ9H321 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
VCX3BQ9H321 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.32■□□□□ 0.52
VCX3BQ9H321 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3BQ9H321 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3BQ9H321 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
VCX3BQ9H321 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
VCX3BQ9H321 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3BQ9H321 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3BQ9H321 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
VCX3BQ9H321 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3BQ9H321 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
VCX3BQ9H321 TEX21P-204ENST00000641479 1693 ntBASIC18.31■□□□□ 0.52
VCX3BQ9H321 PKD1P5-201ENST00000532415 10291 ntBASIC18.31■□□□□ 0.52
VCX3BQ9H321 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.31■□□□□ 0.52
VCX3BQ9H321 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
VCX3BQ9H321 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
VCX3BQ9H321 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
VCX3BQ9H321 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms