Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDH23Q9H251 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CDH23Q9H251 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
CDH23Q9H251 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH23Q9H251 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDH23Q9H251 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH23Q9H251 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.51■□□□□ 0.87
CDH23Q9H251 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH23Q9H251 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH23Q9H251 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDH23Q9H251 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH23Q9H251 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDH23Q9H251 CHCHD2P8-201ENST00000429873 447 ntBASIC20.51■□□□□ 0.87
CDH23Q9H251 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.51■□□□□ 0.87
CDH23Q9H251 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CDH23Q9H251 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.51■□□□□ 0.87
CDH23Q9H251 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.51■□□□□ 0.87
CDH23Q9H251 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC20.51■□□□□ 0.87
CDH23Q9H251 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.5■□□□□ 0.87
CDH23Q9H251 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDH23Q9H251 FEM1AP1-201ENST00000431297 1995 ntBASIC20.5■□□□□ 0.87
CDH23Q9H251 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.5■□□□□ 0.87
CDH23Q9H251 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.5■□□□□ 0.87
CDH23Q9H251 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDH23Q9H251 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.5■□□□□ 0.87
CDH23Q9H251 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH23Q9H251 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC20.5■□□□□ 0.87
CDH23Q9H251 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH23Q9H251 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.5■□□□□ 0.87
CDH23Q9H251 MIR4674-201ENST00000582457 87 ntBASIC20.5■□□□□ 0.87
CDH23Q9H251 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC20.5■□□□□ 0.87
CDH23Q9H251 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH23Q9H251 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDH23Q9H251 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CDH23Q9H251 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.5■□□□□ 0.87
CDH23Q9H251 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH23Q9H251 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH23Q9H251 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CDH23Q9H251 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.5■□□□□ 0.87
CDH23Q9H251 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH23Q9H251 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.5■□□□□ 0.87
CDH23Q9H251 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CDH23Q9H251 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.49■□□□□ 0.87
CDH23Q9H251 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH23Q9H251 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH23Q9H251 AC243591.1-201ENST00000452967 1364 ntBASIC20.49■□□□□ 0.87
CDH23Q9H251 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH23Q9H251 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.49■□□□□ 0.87
CDH23Q9H251 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH23Q9H251 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH23Q9H251 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CDH23Q9H251 AC092667.1-201ENST00000434301 2586 ntBASIC20.49■□□□□ 0.87
CDH23Q9H251 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH23Q9H251 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.49■□□□□ 0.87
CDH23Q9H251 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.49■□□□□ 0.87
CDH23Q9H251 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CDH23Q9H251 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.49■□□□□ 0.87
CDH23Q9H251 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.49■□□□□ 0.87
CDH23Q9H251 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CDH23Q9H251 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.49■□□□□ 0.87
CDH23Q9H251 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.49■□□□□ 0.87
CDH23Q9H251 FEM1AP4-201ENST00000443167 1987 ntBASIC20.49■□□□□ 0.87
CDH23Q9H251 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.49■□□□□ 0.87
CDH23Q9H251 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH23Q9H251 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
CDH23Q9H251 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH23Q9H251 HLA-F-220ENST00000434407 884 ntBASIC20.48■□□□□ 0.87
CDH23Q9H251 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CDH23Q9H251 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.48■□□□□ 0.87
CDH23Q9H251 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH23Q9H251 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH23Q9H251 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.48■□□□□ 0.87
CDH23Q9H251 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
CDH23Q9H251 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.48■□□□□ 0.87
CDH23Q9H251 CFL1-212ENST00000531413 636 ntTSL 3 BASIC20.48■□□□□ 0.87
CDH23Q9H251 REXO1L6P-202ENST00000619970 1078 ntBASIC20.48■□□□□ 0.87
CDH23Q9H251 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.48■□□□□ 0.87
CDH23Q9H251 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.48■□□□□ 0.87
CDH23Q9H251 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH23Q9H251 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.48■□□□□ 0.87
CDH23Q9H251 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH23Q9H251 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH23Q9H251 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CDH23Q9H251 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.48■□□□□ 0.87
CDH23Q9H251 BX842568.4-201ENST00000421222 227 ntBASIC20.48■□□□□ 0.87
CDH23Q9H251 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CDH23Q9H251 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC20.48■□□□□ 0.87
CDH23Q9H251 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
CDH23Q9H251 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH23Q9H251 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDH23Q9H251 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDH23Q9H251 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CDH23Q9H251 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.47■□□□□ 0.87
CDH23Q9H251 AP000867.3-201ENST00000524675 377 ntBASIC20.47■□□□□ 0.87
CDH23Q9H251 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH23Q9H251 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CDH23Q9H251 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.47■□□□□ 0.87
CDH23Q9H251 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CDH23Q9H251 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.47■□□□□ 0.87
CDH23Q9H251 AC027796.2-201ENST00000575326 344 ntBASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms