Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
POLR2J3Q9H1A7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 RPS2P52-201ENST00000469610 820 ntBASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
POLR2J3Q9H1A7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
POLR2J3Q9H1A7 AP006587.1-201ENST00000534129 1502 ntBASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 AC097658.1-201ENST00000475555 843 ntBASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 AC006557.6-201ENST00000623071 864 ntBASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 MYC-209ENST00000641252 345 ntBASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 KRT8P8-201ENST00000434750 1448 ntBASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.77■□□□□ 0.44
POLR2J3Q9H1A7 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
POLR2J3Q9H1A7 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
POLR2J3Q9H1A7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.77■□□□□ 0.43
POLR2J3Q9H1A7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
POLR2J3Q9H1A7 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
POLR2J3Q9H1A7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
POLR2J3Q9H1A7 AL049812.1-201ENST00000432563 2267 ntBASIC17.77■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms