Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 AL137013.1-201ENST00000432946 1228 ntBASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 PKD1P6-201ENST00000343738 4769 ntBASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC23.41■■□□□ 1.34
RPAP1Q9BWH6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RPAP1Q9BWH6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
RPAP1Q9BWH6 NME1-207ENST00000480143 964 ntTSL 2 BASIC23.4■■□□□ 1.34
RPAP1Q9BWH6 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC23.4■■□□□ 1.34
RPAP1Q9BWH6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC23.4■■□□□ 1.34
RPAP1Q9BWH6 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RPAP1Q9BWH6 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RPAP1Q9BWH6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
RPAP1Q9BWH6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC23.4■■□□□ 1.34
RPAP1Q9BWH6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC23.4■■□□□ 1.34
RPAP1Q9BWH6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
RPAP1Q9BWH6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RPAP1Q9BWH6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RPAP1Q9BWH6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
RPAP1Q9BWH6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC23.4■■□□□ 1.34
RPAP1Q9BWH6 RMI2-205ENST00000576027 818 ntTSL 2 BASIC23.4■■□□□ 1.34
RPAP1Q9BWH6 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
RPAP1Q9BWH6 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.4■■□□□ 1.34
RPAP1Q9BWH6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
RPAP1Q9BWH6 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
RPAP1Q9BWH6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC23.39■■□□□ 1.34
RPAP1Q9BWH6 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
RPAP1Q9BWH6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.39■■□□□ 1.33
RPAP1Q9BWH6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RPAP1Q9BWH6 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
RPAP1Q9BWH6 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
RPAP1Q9BWH6 TSPY14P-201ENST00000303979 915 ntBASIC23.39■■□□□ 1.33
RPAP1Q9BWH6 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC23.39■■□□□ 1.33
RPAP1Q9BWH6 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC23.39■■□□□ 1.33
RPAP1Q9BWH6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC23.39■■□□□ 1.33
RPAP1Q9BWH6 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC23.39■■□□□ 1.33
RPAP1Q9BWH6 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC23.39■■□□□ 1.33
RPAP1Q9BWH6 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC23.39■■□□□ 1.33
RPAP1Q9BWH6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC23.39■■□□□ 1.33
RPAP1Q9BWH6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC23.39■■□□□ 1.33
RPAP1Q9BWH6 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 ARMC10P1-201ENST00000313754 855 ntBASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 PRR31-201ENST00000371629 978 ntTSL 2 BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 CLN6-221ENST00000637494 765 ntTSL 5 BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RPAP1Q9BWH6 AC093484.2-201ENST00000580996 2166 ntBASIC23.37■■□□□ 1.33
RPAP1Q9BWH6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC23.37■■□□□ 1.33
RPAP1Q9BWH6 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
RPAP1Q9BWH6 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC23.37■■□□□ 1.33
RPAP1Q9BWH6 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RPAP1Q9BWH6 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RPAP1Q9BWH6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RPAP1Q9BWH6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
RPAP1Q9BWH6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
RPAP1Q9BWH6 AC011506.1-201ENST00000474329 610 ntBASIC23.37■■□□□ 1.33
RPAP1Q9BWH6 DUX4L26-201ENST00000489078 1255 ntBASIC23.37■■□□□ 1.33
RPAP1Q9BWH6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
RPAP1Q9BWH6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC23.37■■□□□ 1.33
RPAP1Q9BWH6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC23.37■■□□□ 1.33
RPAP1Q9BWH6 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC23.37■■□□□ 1.33
RPAP1Q9BWH6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.37■■□□□ 1.33
RPAP1Q9BWH6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
RPAP1Q9BWH6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RPAP1Q9BWH6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RPAP1Q9BWH6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RPAP1Q9BWH6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RPAP1Q9BWH6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RPAP1Q9BWH6 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RPAP1Q9BWH6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC23.36■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms