Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 AC005082.1-201ENST00000413042 2259 ntBASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CPPED1Q9BRF8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 CROCCP5-201ENST00000436658 830 ntBASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 AC026185.1-201ENST00000445748 174 ntBASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 KRT18P16-201ENST00000510337 1294 ntBASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 AC091874.3-201ENST00000512672 1195 ntBASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 AC092118.2-201ENST00000613495 667 ntBASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 AC135050.7-201ENST00000624508 2218 ntBASIC18.1■□□□□ 0.49
CPPED1Q9BRF8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 IKBKGP1-201ENST00000612193 1073 ntBASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 FEM1AP3-201ENST00000403722 1741 ntBASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.09■□□□□ 0.49
CPPED1Q9BRF8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC18.08■□□□□ 0.49
CPPED1Q9BRF8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CPPED1Q9BRF8 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.08■□□□□ 0.49
CPPED1Q9BRF8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
CPPED1Q9BRF8 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.08■□□□□ 0.49
CPPED1Q9BRF8 AC079598.2-202ENST00000546624 1451 ntBASIC18.08■□□□□ 0.49
CPPED1Q9BRF8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms