Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SMOQ99835 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMOQ99835 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SMOQ99835 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
SMOQ99835 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.23■□□□□ 0.83
SMOQ99835 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.23■□□□□ 0.83
SMOQ99835 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMOQ99835 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.23■□□□□ 0.83
SMOQ99835 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMOQ99835 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMOQ99835 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMOQ99835 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMOQ99835 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.23■□□□□ 0.83
SMOQ99835 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SMOQ99835 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.23■□□□□ 0.83
SMOQ99835 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SMOQ99835 CKBP1-201ENST00000565489 1086 ntBASIC20.23■□□□□ 0.83
SMOQ99835 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.23■□□□□ 0.83
SMOQ99835 AC097493.4-201ENST00000641197 219 ntBASIC20.23■□□□□ 0.83
SMOQ99835 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMOQ99835 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMOQ99835 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMOQ99835 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMOQ99835 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMOQ99835 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.23■□□□□ 0.83
SMOQ99835 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMOQ99835 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SMOQ99835 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMOQ99835 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMOQ99835 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMOQ99835 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
SMOQ99835 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SMOQ99835 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMOQ99835 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.22■□□□□ 0.83
SMOQ99835 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMOQ99835 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.22■□□□□ 0.83
SMOQ99835 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.22■□□□□ 0.83
SMOQ99835 TSPY23P-201ENST00000440136 739 ntBASIC20.22■□□□□ 0.83
SMOQ99835 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.22■□□□□ 0.83
SMOQ99835 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.22■□□□□ 0.83
SMOQ99835 NAPSB-206ENST00000562112 1266 ntBASIC20.22■□□□□ 0.83
SMOQ99835 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.22■□□□□ 0.83
SMOQ99835 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMOQ99835 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMOQ99835 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMOQ99835 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMOQ99835 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SMOQ99835 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMOQ99835 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SMOQ99835 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.21■□□□□ 0.83
SMOQ99835 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMOQ99835 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMOQ99835 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMOQ99835 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SMOQ99835 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMOQ99835 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
SMOQ99835 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SMOQ99835 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMOQ99835 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMOQ99835 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.21■□□□□ 0.83
SMOQ99835 LINC01023-201ENST00000606054 436 ntBASIC20.21■□□□□ 0.83
SMOQ99835 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMOQ99835 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.21■□□□□ 0.83
SMOQ99835 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SMOQ99835 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SMOQ99835 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SMOQ99835 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SMOQ99835 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.21■□□□□ 0.83
SMOQ99835 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.21■□□□□ 0.83
SMOQ99835 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
SMOQ99835 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.2■□□□□ 0.82
SMOQ99835 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
SMOQ99835 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMOQ99835 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.2■□□□□ 0.82
SMOQ99835 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.2■□□□□ 0.82
SMOQ99835 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMOQ99835 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.2■□□□□ 0.82
SMOQ99835 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
SMOQ99835 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMOQ99835 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.2■□□□□ 0.82
SMOQ99835 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
SMOQ99835 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
SMOQ99835 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
SMOQ99835 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMOQ99835 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
SMOQ99835 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
SMOQ99835 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.2■□□□□ 0.82
SMOQ99835 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
SMOQ99835 AC093484.2-201ENST00000580996 2166 ntBASIC20.19■□□□□ 0.82
SMOQ99835 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMOQ99835 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.19■□□□□ 0.82
SMOQ99835 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.19■□□□□ 0.82
SMOQ99835 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
SMOQ99835 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.19■□□□□ 0.82
SMOQ99835 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMOQ99835 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
SMOQ99835 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.19■□□□□ 0.82
SMOQ99835 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMOQ99835 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
SMOQ99835 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms