Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC25.73■■□□□ 1.71
ABCA3Q99758 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ABCA3Q99758 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
ABCA3Q99758 AKR1C7P-201ENST00000305623 895 ntBASIC25.73■■□□□ 1.71
ABCA3Q99758 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC25.73■■□□□ 1.71
ABCA3Q99758 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC25.73■■□□□ 1.71
ABCA3Q99758 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC25.73■■□□□ 1.71
ABCA3Q99758 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC25.73■■□□□ 1.71
ABCA3Q99758 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
ABCA3Q99758 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
ABCA3Q99758 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC25.73■■□□□ 1.71
ABCA3Q99758 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
ABCA3Q99758 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
ABCA3Q99758 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
ABCA3Q99758 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ABCA3Q99758 NUS1P1-201ENST00000446295 882 ntBASIC25.72■■□□□ 1.71
ABCA3Q99758 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC25.72■■□□□ 1.71
ABCA3Q99758 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC25.72■■□□□ 1.71
ABCA3Q99758 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC25.72■■□□□ 1.71
ABCA3Q99758 RNF126P1-202ENST00000569893 925 ntBASIC25.72■■□□□ 1.71
ABCA3Q99758 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC25.72■■□□□ 1.71
ABCA3Q99758 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ABCA3Q99758 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ABCA3Q99758 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ABCA3Q99758 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC25.72■■□□□ 1.71
ABCA3Q99758 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
ABCA3Q99758 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC25.71■■□□□ 1.71
ABCA3Q99758 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
ABCA3Q99758 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC25.71■■□□□ 1.71
ABCA3Q99758 TP73-AS1-207ENST00000624167 988 ntBASIC25.71■■□□□ 1.71
ABCA3Q99758 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
ABCA3Q99758 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ABCA3Q99758 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ABCA3Q99758 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC25.71■■□□□ 1.71
ABCA3Q99758 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
ABCA3Q99758 LINC00265-3P-201ENST00000447588 903 ntBASIC25.71■■□□□ 1.71
ABCA3Q99758 AL136038.4-201ENST00000603606 1261 ntBASIC25.71■■□□□ 1.71
ABCA3Q99758 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC25.71■■□□□ 1.71
ABCA3Q99758 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC25.7■■□□□ 1.71
ABCA3Q99758 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
ABCA3Q99758 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC25.7■■□□□ 1.71
ABCA3Q99758 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ABCA3Q99758 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC25.7■■□□□ 1.7
ABCA3Q99758 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ABCA3Q99758 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ABCA3Q99758 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ABCA3Q99758 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC25.7■■□□□ 1.7
ABCA3Q99758 AC138894.3-201ENST00000603787 634 ntBASIC25.7■■□□□ 1.7
ABCA3Q99758 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ABCA3Q99758 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC25.7■■□□□ 1.7
ABCA3Q99758 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
ABCA3Q99758 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
ABCA3Q99758 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC25.7■■□□□ 1.7
ABCA3Q99758 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ABCA3Q99758 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ABCA3Q99758 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC25.69■■□□□ 1.7
ABCA3Q99758 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC25.69■■□□□ 1.7
ABCA3Q99758 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
ABCA3Q99758 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC25.69■■□□□ 1.7
ABCA3Q99758 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ABCA3Q99758 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC25.69■■□□□ 1.7
ABCA3Q99758 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ABCA3Q99758 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ABCA3Q99758 AC024243.1-201ENST00000609234 778 ntBASIC25.68■■□□□ 1.7
ABCA3Q99758 GXYLT1P4-201ENST00000613576 1192 ntBASIC25.68■■□□□ 1.7
ABCA3Q99758 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ABCA3Q99758 HLA-A-201ENST00000376802 1334 ntBASIC25.68■■□□□ 1.7
ABCA3Q99758 UBC-206ENST00000538617 1303 ntTSL 5 BASIC25.68■■□□□ 1.7
ABCA3Q99758 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ABCA3Q99758 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ABCA3Q99758 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
ABCA3Q99758 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ABCA3Q99758 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC25.68■■□□□ 1.7
ABCA3Q99758 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ABCA3Q99758 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC25.68■■□□□ 1.7
ABCA3Q99758 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
ABCA3Q99758 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC25.68■■□□□ 1.7
ABCA3Q99758 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ABCA3Q99758 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ABCA3Q99758 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC25.68■■□□□ 1.7
ABCA3Q99758 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC25.68■■□□□ 1.7
ABCA3Q99758 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC25.68■■□□□ 1.7
ABCA3Q99758 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC25.68■■□□□ 1.7
ABCA3Q99758 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC25.67■■□□□ 1.7
ABCA3Q99758 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
ABCA3Q99758 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC25.67■■□□□ 1.7
ABCA3Q99758 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ABCA3Q99758 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC25.67■■□□□ 1.7
ABCA3Q99758 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC25.67■■□□□ 1.7
ABCA3Q99758 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
ABCA3Q99758 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ABCA3Q99758 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC25.67■■□□□ 1.7
ABCA3Q99758 KRT18P31-201ENST00000506277 1292 ntBASIC25.67■■□□□ 1.7
ABCA3Q99758 RNA5SP419-201ENST00000515908 135 ntBASIC25.67■■□□□ 1.7
ABCA3Q99758 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
ABCA3Q99758 AC074051.2-201ENST00000565115 352 ntBASIC25.67■■□□□ 1.7
ABCA3Q99758 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC25.67■■□□□ 1.7
ABCA3Q99758 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
ABCA3Q99758 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
ABCA3Q99758 LINC00167-201ENST00000530583 1419 ntBASIC25.67■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms